KEGG   Intrasporangium calvum: Intca_0627Help
Entry
Intca_0627        CDS       T01385                                 
Definition
DNA polymerase LigD, polymerase domain-containing protein
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
ica  Intrasporangium calvum
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:ica03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ica03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ica03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ica03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
686491..687402
Genome map
AA seq 303 aa AA seqDB search
MPGRQRNENGEKVAVEVEGRRMRLSSLEKVMFPATGTTKAQVIDYYARIAPVLLPHLADR
PVTRIRYPHGVGDLQFFEKNVPAGVPEWIRRAGRDPVFPFIDDLAGLTFFANLNSLELHV
PQWRFEGEGPDAVPRNPDRLVIDLDPGPGTGLREVSGVAVIVRDRLADIGLATVPVTSGS
KGMQLYARLPGGAHSSDQIRDTVQQLAQELTKRHPDRIVWKMAKDLRPGKIFLDWSQNVA
AKTTVCPYSLRGREAPTVAAPRTWAEVEAGAAGEELRQLWFNEVLDRVAAHGDLAVEIAA
PAT
NT seq 912 nt NT seq  +upstreamnt  +downstreamnt
atgccgggccggcagcggaacgagaacggcgagaaggtggccgtcgaggtcgagggccgg
cggatgcggctgagcagcctggaaaaggtgatgtttccagcgaccgggacgacaaaggcg
caggtcatcgactattacgcgcggatcgccccggtgctgttgccccacttggccgaccgg
ccggtgacccgaattcggtatccgcacggggtcggcgacctccagttcttcgagaagaac
gtgccggcaggggtccccgagtggattcggcgggccgggcgagacccggtgttccccttc
atcgacgacctggcggggctcaccttcttcgcgaatctcaactcgctcgagctccacgtg
ccgcaatggcgtttcgaaggtgaaggccctgacgccgttccccgcaaccccgaccggctc
gtgatcgacctggatccggggcccgggaccgggctgcgggaggtctcgggggtcgctgtg
atcgtccgggaccggctggcggacatcggtctggcgaccgtgcccgtgacgagcgggagc
aagggcatgcaactgtacgcacggctgcccgggggcgcccactcgagcgaccagatccgg
gacaccgtgcagcagctggctcaggagctgaccaagcggcatccggaccgcatcgtctgg
aagatggccaaggacctgcggcccggcaagatcttcctcgactggagccagaacgtggcg
gcgaagacgacggtctgcccgtactcgctccgagggcgcgaggcccccacggtcgccgcc
ccgcggacctgggcggaggtcgaggcgggcgccgcgggtgaggagctgcgacagctgtgg
ttcaacgaggtgctcgaccgggtcgcggcgcacggggacctggcggtggagatcgccgcg
ccggccacctga
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