KEGG   Intrasporangium calvum: Intca_0733
Entry
Intca_0733        CDS       T01385                                 
Name
(GenBank) helicase domain protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
ica  Intrasporangium calvum
Pathway
ica03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ica00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Intca_0733
  09124 Replication and repair
   03420 Nucleotide excision repair
    Intca_0733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ica03021]
    Intca_0733
   03400 DNA repair and recombination proteins [BR:ica03400]
    Intca_0733
Enzymes [BR:ica01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Intca_0733
Transcription machinery [BR:ica03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Intca_0733
DNA repair and recombination proteins [BR:ica03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Intca_0733
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: ADU47277
UniProt: E6SB16
Position
complement(801197..802849)
AA seq 550 aa
MNDGPLIVQSDKTLLLEVDHPRAEEARRAIAPFAELERAPEHVHTYRVTPLGLWNARAAG
HDAEQVVDALITFSRYAVPHALLVDIADTMDRYGRLTLEKEGFADSAEGTRLVLRTTDRP
VLEEVLRHKKIQPLLGERIDDLAVVVHPSERGHLKQELLKVGWPAEDLAGYVDGEAHPID
LRQDDWHLRPYQQQAVDGFWHGGSGVVVLPCGAGKTLVGAGAMAAAKATTLILVTNTVSA
RQWKDELIRRTSLTEEEIGEYSGARKEIRPVTIATYQVLTTRRKGAYTHLDLLDARDWGL
VVYDEVHLLPAPIFRMTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKDIEA
QGYIAPADCVEVRVTLPDSLRLAYATAEPEDRYRLASCADAKLAVVEQLAQRHTAEPTLI
IGQYLDQLHEIAERLDADVITGETTVRERQRLYDAFRRGEITRLVVSKVANFSIDLPEAS
VAIQVSGTFGSRQEEAQRLGRVLRPKGDGRTAHFYTVVARDTVDADFAAHRQRFLAEQGY
SYRIVDATDL
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaatgacggacccctgatcgtccagagcgacaagaccctgctcctcgaggtcgaccac
ccgcgcgccgaggaggcgcgccgggccatcgcgcccttcgccgagctcgagcgcgccccg
gagcacgtccacacctaccgggtcacgccgctcggcctgtggaacgcccgcgcagccggc
cacgacgcggagcaggtcgtcgacgcgctcatcaccttcagccgctacgccgtcccgcac
gcactcctcgtcgacatcgccgacaccatggatcgctacggccgcctcaccctcgagaag
gagggtttcgccgacagtgcggagggcacccgtctggtgctgcgcaccacggaccgtccc
gtcctcgaggaggtcctgcgccacaagaagatccagccgctgctcggtgagcgcatcgac
gacctcgcggtcgtcgtccacccgagcgagcgcggccacctcaagcaggagctgctcaag
gtcggctggccggccgaggacctcgccggctacgtcgacggcgaggcgcaccccatcgac
ctgaggcaggacgactggcacctccggccctaccagcagcaggcggtcgacggcttctgg
cacggcggatcgggcgtggtcgtcctcccctgcggcgccggcaagacgctcgtgggcgcc
ggcgcgatggccgcggcgaaggccaccaccctcatcctcgtcaccaacaccgtcagcgcc
cggcagtggaaggacgagctgatccgccgcacctcactgaccgaggaggagatcggcgag
tactccggcgcccgcaaggagatccgcccggtcaccatcgcgacctaccaggtgctgacg
actcggcggaagggcgcctacacgcacctcgacctgctcgatgcccgagactggggcctt
gtcgtctatgacgaggtgcacctgctcccggcgccgatcttccggatgaccgcggacctc
caggcccgtcgacggctcggcctcaccgccacgctcgtccgggaggacggccgcgagtca
gacgtcttcagcctcatcgggcccaagcgcttcgacgcaccgtggaaggacatcgaggcg
cagggctacatcgcgccggccgactgcgtcgaggtccgggtcaccctgcctgactcgctc
cgactcgcctacgcgaccgccgaaccggaggaccgctaccggctggcgagctgcgccgac
gcgaagctcgcggtcgtcgagcagctggcccagcggcatacggcggagccaaccctcatc
atcggccagtacctcgaccagctccacgagatcgccgagcggctcgacgccgacgtcatc
accggcgagacgacggtccgggaacgccagcggctctacgacgcgttccgccggggcgag
atcacccgcctcgtcgtctcgaaggtggccaacttctcgatcgacctgcccgaggcgagc
gtggcgatccaggtcagcgggacgttcggctcccgccaggaggaggcgcaacggctcggg
cgcgtgttgcgccccaagggcgacgggcggacggcgcacttctacaccgtggtcgcccgg
gacaccgtcgacgcggacttcgcggcccaccgccagcggttcctcgccgagcagggctat
tcctaccggatcgtcgacgccaccgacctctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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