KEGG   Intrasporangium calvum: Intca_1898Help
Entry
Intca_1898        CDS       T01385                                 
Definition
DNA polymerase LigD, polymerase domain-containing protein
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
ica  Intrasporangium calvum
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:ica03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ica03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ica03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ica03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2133048..2134016)
Genome map
AA seq 322 aa AA seqDB search
MAAAKQTPALVLDVDGYDVRLTNPDRVYFSEGGQTKLDLANYYLSVGPGIVNALRDRPCM
LHRFPKGVEGPKVHQKRLPAGAPPWVETVRLHFPRFGLHADELCVQRLADVIWAVQMSTV
EFHPWNSRRADTEKPDEWRIDLDPMPRCGYDTVRRAAHVSREILGELGAVGWPKTSGGRG
LHIYVRIAPVHGFQDVRRAALAFAREVERRLPDDVTTAWWRRDRAPDDLFVDYNQNARDH
TIAAAYSVRGNSRGTVSAPVTWDEIDDAVPDDFTIATMPDRFARLGDLHAGIDDAVFDLA
PLLEWAERDERAGQDTPPEPEE
NT seq 969 nt NT seq  +upstreamnt  +downstreamnt
atggccgcggcgaagcagaccccagccctcgtcctcgacgtcgacggctacgacgtccgc
ctgaccaaccccgaccgggtgtacttctccgagggcggccagaccaagctcgacctcgcg
aactactacctgtcggtcgggccggggatcgtcaacgccctccgcgaccgcccgtgcatg
ctccaccgcttccccaagggcgtggagggtcccaaggtgcaccagaagcggctgccggcg
ggtgcgccgccgtgggtggagacggtgcggctgcacttcccccgcttcggcctgcacgcc
gacgagctgtgcgtccagcgcctcgccgatgtcatctgggccgttcagatgtccaccgtc
gagttccatccgtggaactcccgccgcgcggacaccgagaagcccgacgagtggcggatc
gacctcgaccccatgcccaggtgcggctacgacacggtacggcgggccgcccacgtgagc
cgcgagatcctgggcgagctgggggcggtcgggtggcccaagacctcgggtggccggggc
ctgcacatctacgtccggatcgcgccggtgcacggcttccaggacgtccgccgggctgcg
ctggccttcgcgcgggaggtcgagcggcgcctccccgacgacgtgacgacggcctggtgg
cgccgcgaccgcgcgccggacgacctcttcgtcgactacaaccagaacgcccgcgaccac
accatcgccgcggcctacagcgtgcggggcaacagccgggggacggtgtcggctcccgtg
acgtgggacgagatcgacgacgccgtcccggacgacttcaccatcgcgacgatgccggac
cggttcgcccggctcggtgacctccacgcgggcatcgacgacgccgtcttcgacctcgcg
ccgctgctcgagtgggcggagcgggacgagagggcgggtcaggacacccctcccgagccg
gaggaataa
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