KEGG   Intrasporangium calvum: Intca_2310Help
Entry
Intca_2310        CDS       T01385                                 

Definition
bifunctional DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ica  Intrasporangium calvum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ica00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Intca_2310
Enzymes [BR:ica01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Intca_2310
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Intca_2310
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2582636..2583514)
Genome map
AA seq 292 aa AA seqDB search
MPELPEVEVVRRGLLDHVVGRHITRAAITGLRVARRHVAGPEDLADRVSGTTVTAASRRG
KYLWLVLDGDEALIIHLGMSGQMLVKPADAPREKHCHAAFDFADDGPQLRFVDQRTFGGL
ALSPLGTDGIPDAVRHIAPDPFEPVFDQVSVVRRMKARESAVKRALLDQSLVSGIGNIYA
DEALWRARVHGERVCASLTKPVLSRVLDHAREVMAEALTQGGTSFDALYVNVNGASGYFD
RSLHAYGRDGTPCDRCGARMRREQFMNRSSFSCPACQPRPRTSRTAMAPRLP
NT seq 879 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagcttcctgaagtggaggtcgttcgccggggcctgctggaccacgtcgtcggc
cgacacatcacccgggccgccatcaccggactccgggtcgctcgccgccacgtcgccggc
ccggaggacctcgcagaccgcgtcagcggaacgaccgtcacggccgcctcccgacgtggg
aagtacctctggctcgtgctggacggcgacgaggccctgatcatccacctcggcatgagc
ggtcagatgctcgtcaaaccggccgacgcgccgcgcgagaagcactgccatgccgccttc
gacttcgccgacgacggcccccagctccggttcgtcgaccagcggacgttcggcggactg
gccctgtcacccctgggcaccgatggcatccccgatgcggtgcgccacatcgcaccggac
ccgttcgagccggtcttcgaccaggtctccgtcgtacgtcgcatgaaggcgagggagagc
gcggtcaagcgagccctgctcgaccagtcgctggtgtccggcatcggcaacatctacgcc
gacgaggccctgtggcgggcccgggtccacggcgagcgagtctgcgccagtctcaccaag
ccggtgctgagccgagtcctcgaccacgcccgcgaggtgatggccgaggcgctcacccag
ggcggcacgagcttcgacgccctctacgtcaacgtcaacggcgcgagcggctacttcgac
cggtcgctgcacgcctatggccgcgacggcaccccctgcgaccgctgcggagcccggatg
cgccgagagcagttcatgaaccggtcctcgttctcctgcccagcctgccagccgcggccg
aggacgagccgcaccgccatggcgcctcggctgccctga

DBGET integrated database retrieval system