KEGG   Idiomarina loihiensis L2TR: IL0011Help
Entry
IL0011            CDS       T00218                                 

Gene name
fadB
Definition
(GenBank) Fatty acid oxidation complex alpha subunit
  KO
K01825  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
ilo  Idiomarina loihiensis L2TR
Pathway
ilo00071  Fatty acid degradation
ilo00280  Valine, leucine and isoleucine degradation
ilo00281  Geraniol degradation
ilo00310  Lysine degradation
ilo00362  Benzoate degradation
ilo00380  Tryptophan metabolism
ilo00410  beta-Alanine metabolism
ilo00640  Propanoate metabolism
ilo00650  Butanoate metabolism
ilo00903  Limonene and pinene degradation
ilo00930  Caprolactam degradation
ilo01040  Biosynthesis of unsaturated fatty acids
ilo01100  Metabolic pathways
ilo01110  Biosynthesis of secondary metabolites
ilo01120  Microbial metabolism in diverse environments
ilo01130  Biosynthesis of antibiotics
ilo01200  Carbon metabolism
ilo01212  Fatty acid metabolism
Module
ilo_M00087  beta-Oxidation
Brite
KEGG Orthology (KO) [BR:ilo00001]
 Metabolism
  Carbohydrate metabolism
   00640 Propanoate metabolism
    IL0011 (fadB)
   00650 Butanoate metabolism
    IL0011 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    IL0011 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    IL0011 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    IL0011 (fadB)
   00310 Lysine degradation
    IL0011 (fadB)
   00380 Tryptophan metabolism
    IL0011 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    IL0011 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    IL0011 (fadB)
   00281 Geraniol degradation
    IL0011 (fadB)
  Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    IL0011 (fadB)
   00930 Caprolactam degradation
    IL0011 (fadB)
Enzymes [BR:ilo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     IL0011 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     IL0011 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     IL0011 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  Delta3-Delta2-enoyl-CoA isomerase
     IL0011 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 3HCDH_N ECH_1 3HCDH ECH_2 NAD_binding_2
Motif
Other DBs
NCBI-ProteinID: AAV80855
UniProt: Q5QXH7
Position
complement(12377..14533)
Genome map
AA seq 718 aa AA seqDB search
MIYQGESIRVDFIEPGFAELQFDAKGSVNKFDQATLEEFSEALTKLQNTDDLRGVIVTSS
KSTFIVGADITEFLTLFSDQEKTRSWVAKASRVFDQLEDLPVPTVGAVTGFALGGGCEAL
LACDYRVADTTATIGLPEVKLGLIPGFGGTMRLPRVIGPDNALEWITTGKNNKALDALKV
GAVDAVVEPENLTKAALNLAKAAAAGQQDWKAKRQPKLEPLKANDTELMMTLVTAKGMIA
AKAGKHYPAPHKALEAIENGAREHREGALTAENNAFFDLTQTEACQAQVGIFLADQAVKG
KSKKYAKAATKEIKTAGVLGAGIMGGGIAYQSALKGVPAVMKDIKQDALDLGMKEAGKIL
KKGVERGKVNNEKMIKILSSITPTLLNDAVKDVDIVVEAVVENPKVKGSVLAEIEGVIGD
DAILTSNTSTISITELAKNLKRPEKFCGMHFFNPVHKMPLVEIIRGEKTSDDTVNAVVAY
ALKLGKTPIVVNDCPGFLVNRVLFPYLAGFAGMVDEGVDFVGIDKVMEKQFGWPMGPAYL
SDVVGIDTADHCTVVMEAGFPTRMKRDESSAIAKLAAAERYGQKNGKGFYVYGTDKKGKP
TKEADPATYELLGCEQGKKLDADEVIARCMIPMVNEVVRCLEEDIVGSAAEADMALLYGL
GFPPFRGGPFRYLETLGMDNFIQLADKYAHLGEIYQVTDGMREMAKAGKSYFDTTSAK
NT seq 2157 nt NT seq  +upstreamnt  +downstreamnt
atgatctatcaaggtgaaagcattcgggtcgattttatcgaaccaggtttcgcagaatta
caatttgatgcgaaaggctcggttaataaattcgaccaggctacattagaagaattcagt
gaagcactgacaaaattacagaacactgacgatttacgtggcgttattgttaccagcagc
aaatcgacctttattgtcggcgctgacattaccgagttcctgacgctattctctgatcag
gaaaaaacccgcagctgggtggcaaaagcctcacgcgtgtttgatcaattagaagacctg
ccagttccaaccgttggagccgtaaccggattcgcactgggcggcggttgtgaagcattg
ttagcctgtgactaccgtgttgcggacaccacagcaactatcggcctgccagaagttaaa
ctgggtcttatcccgggctttggcggcaccatgcgtttacctcgcgtgattggtccggac
aacgcgcttgagtggataaccacaggtaaaaacaacaaagcccttgatgcgctgaaagtt
ggtgctgtggatgcggttgttgaaccggaaaacctgactaaagccgcactcaacttagct
aaagccgcagcagccggtcagcaggactggaaagcgaagcgtcagcctaagttagagccg
ctgaaagctaacgacaccgagctgatgatgacgctggttaccgccaaaggcatgattgca
gcgaaggccggtaagcactatccggcaccgcacaaagcgttagaagccattgaaaacggt
gcccgcgagcatcgtgaaggcgcgctaacagctgaaaacaacgcgtttttcgacctcacc
caaaccgaggcttgtcaggctcaggttggtatcttcctggcggatcaggcagttaaaggt
aagtcgaaaaaatacgctaaagctgcaaccaaagaaattaagacagcaggtgttttaggt
gccggcattatgggcggcggtatcgcttaccagtcagcgcttaaaggcgtaccggctgtt
atgaaagacattaagcaagacgctttagacttaggcatgaaagaagccggcaagatcctg
aaaaaaggtgttgagcgcggtaaggtaaacaacgagaagatgattaaaatcttgtcttct
attacgcctacgttgctgaatgacgcagtcaaagacgtcgatattgtcgtagaagccgtt
gtcgaaaacccgaaagttaaaggctcggtgctggctgaaattgaaggcgtaattggcgat
gatgccattttgacttcaaatacctcgaccatttctattactgaactggctaagaacctg
aagcgccctgagaaattctgcggaatgcactttttcaacccggtacacaaaatgccattg
gttgaaattatccgtggcgagaaaacctcagatgacaccgttaatgcggtagtcgcctat
gcgcttaaacttggcaaaacccctatcgttgttaacgactgccctggcttcttagttaac
cgcgtattgttcccttacctggcaggctttgccggtatggttgatgaaggcgtcgatttc
gtcggcatcgacaaggttatggagaagcagttcggttggccaatgggtcctgcgtactta
agcgatgttgttggtatagacacagctgatcattgtaccgttgttatggaagcaggcttc
ccgacccgcatgaaacgcgacgagtccagcgccattgctaaactggcagctgctgagcgt
tacggtcagaaaaacggcaaaggcttctatgtttacggcaccgacaaaaaaggtaagcca
accaaagaagcggatcctgccacttacgagctattaggctgtgagcaaggcaagaaactg
gatgctgatgaagtcattgcacgctgcatgatccctatggtgaacgaagtggttcgctgt
ctggaagaagacattgttggctctgctgccgaagcagacatggcgctgctttatggctta
ggcttccctccattccgcggcggccctttccgttatctggaaacgcttggcatggacaac
tttattcaactggcagacaagtacgcgcacctgggtgaaatttatcaggttaccgacggc
atgcgcgaaatggctaaagccggtaaatcttactttgacacaaccagcgcgaagtaa

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