KEGG   Idiomarina loihiensis L2TR: IL1755Help
Entry
IL1755            CDS       T00218                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
ilo  Idiomarina loihiensis L2TR
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:ilo00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    IL1755 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    IL1755 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    IL1755 (trpB)
Enzymes [BR:ilo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     IL1755 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1890003..1891226
Genome map
AA seq 407 aa AA seqDB search
MSQSLPAYFGDFGGQFVPEILLPALEQLEQAFIEAQQDDDFQAEFRGLLKNYLGRPTPLS
LCRNLPLNSPNKTKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKTRIIAETGAGQHGTA
TALACALLDLECIIYMGKKDVERQQPNVFRMELMGAKVVPVDTGSGTLKDAVNEALRDWT
ASYPNTHYLLGTAAGAHPFPTIVREFHRMIGEEAKAQIIEQAGRLPDEVIACVGGGSNAI
GMFADFIDEEGVDLVGVEPAGKGVETKQHGATLAAGKPGILHGCLSFLMQNDEGQIEESY
SVSAGLDYPGVGPQHAHLKAIGRARYESVTDEEALEAFKLLSRHEGIIPALEPAHALAYA
LKRAAEPDAPEILLLNLSGRGDKDIDHVRRIFSAQENAEVSAKGEQK
NT seq 1224 nt NT seq  +upstreamnt  +downstreamnt
atgagtcagtcattacccgcttattttggcgatttcggcggccagttcgttcctgagatc
ttactacccgcactagagcagttggaacaggcctttatagaggcacaacaggacgatgac
tttcaggctgaatttcgcggattgttgaaaaactacttaggcagaccgacaccactgagt
ttgtgccgtaacctgccgctgaacagcccaaataaaaccaaaatttatcttaaacgtgaa
gatttacttcatggcggcgcccacaaaaccaaccaggtgctgggacaagcgttactggct
aagcgcatgggtaaaacgcgcattattgcagaaactggtgcagggcagcacggcaccgca
acagccctggcctgcgcactgctggacctggaatgcattatttatatgggcaaaaaagat
gttgagcgccagcagcccaatgtcttccgtatggaattaatgggcgcaaaagtggtacct
gtggataccggtagcggtactctaaaagatgcggtcaatgaagctctgcgtgactggaca
gcaagttatcccaacacccactacttattaggaacagctgcaggcgcacaccccttcccg
actatagtgcgtgaatttcaccgcatgattggtgaagaagctaaagcccaaattatcgag
caagctggtcgcttaccggacgaagttattgcctgtgtcggcggcggatccaacgccatt
ggcatgttcgccgactttatcgacgaggaaggtgttgatttagtaggtgttgagcctgca
ggtaaaggtgttgaaaccaagcagcacggcgctacgctggctgcgggtaaacccgggatt
ttgcatggttgtctatcgtttttaatgcaaaacgacgaaggacaaattgaggagtcctat
tcagtatcagccggtctggactaccccggcgtgggccctcaacatgcgcatttaaaagct
attggtcgggcgcgatacgaatcagtaaccgatgaagaagcactggaagcctttaagctg
ctctcccgccatgaaggcattattcctgcgctggaacctgcccatgcgctggcttacgcg
ctaaaacgagccgcagaaccagatgctccggaaatattactacttaacttatccggccgc
ggtgataaagacattgaccacgtacgtcgtatttttagtgctcaggaaaatgctgaagtt
agcgcgaaaggagaacaaaaatga

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