KEGG   Ipomoea nil (Japanese morning glory): 109169651
Entry
109169651         CDS       T04663                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
  KO
K14557  U3 small nucleolar RNA-associated protein 6
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109169651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ini03009]
    109169651
Ribosome biogenesis [BR:ini03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    109169651
SSDB
Motif
Pfam: U3_assoc_6 TPR_14 Suf
Other DBs
NCBI-GeneID: 109169651
NCBI-ProteinID: XP_019174063
Position
Un
AA seq 649 aa
MADVVQYKLERMLPELDDLERRGLFSKFEIGEIVKQRRKFEYRLKRHSPLKSDFIAYIDY
EKQLDALRLLRKRALMKEDGHAKSKKSVSDFSGVARIVEIYRLATNRFKGDIELWFQYLE
FCRERRNGRMKKALVDAIRMHPTVPGLWIYAASWEFDQNLNVAAARALMQRGFRACPSSE
DLWIEYLRMELTYLNKLKARKVALGEDVGTLTNDQKNAKEKQWRDENKELFMSLDDEIKD
DKASNPQDAEQKDKVDLFKEHGFSIFQTVYNSAIEAIPSSFSLRTRFLEILDATDLAHSE
DMQKQILDDLKKDFCKEPTYWDWLARLEMFGLKNVEKVSEGMISDRVREAIQVYEEGLKV
VPSATMFELYVKFLTDAIPCGNGDGKSSDNSSNHVGDPIAQLLMVYEKAESMGCITEALA
CQHVSFLLQLGKQVEAKTLVEKFCTGKFSEAVHLWALRLSIEMMCTENGFSSNKAALLSF
FELLRNVLMKVSISKAENLWLMALKVFSSHKQIFDKLIDTAVALLAKDGGSDGGFSLSSA
IVNYVLQKDGLRSAREMYRRFIALPHPGLSIYKNCIELELSIVSTGDEGSLANARSLYDA
MLTTYDQDANLWRDYYSMEVKFGTLEKAAAVEWRARKTLNKGFPLLSTV
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggcggatgtggtgcagtacaagctggagcggatgctcccggagctggacgacctggaa
cggcgcggcttgttcagcaaattcgagataggggagattgtcaagcagcgccggaagttc
gagtaccggctgaagaggcacagcccgctgaaatcggatttcatagcgtatattgattac
gagaagcagctcgacgctctccgcctcctgcggaagagagctctgatgaaggaggacggc
cacgcaaaatcgaagaaatcggtttcggatttctccggcgttgcgaggattgtggagata
tatcgcctcgctacgaatcggtttaagggcgacattgagctctggtttcagtatttggag
ttctgcagagagcgaagaaatggtagaatgaagaaggctctggttgatgcaattaggatg
cacccaacagtgcctgggctttggatttacgctgcatcttgggaatttgaccaaaactta
aatgttgcagctgctcgtgccttgatgcaacgtggttttagagcatgcccaagttctgag
gatctatggatagaatatcttcgcatggagctcacctaccttaataaattaaaggctaga
aaagtagctctgggagaagatgtaggcacgctgacaaacgatcagaaaaatgcaaaagag
aagcagtggagagatgagaacaaagaattatttatgtcccttgatgatgagattaaggat
gacaaagcatcaaatcctcaagatgcagaacaaaaggacaaagttgatttatttaaagag
catggttttagcatttttcaaactgtatacaatagtgctattgaagccatcccttctagt
ttcagcttaagaacgcgatttcttgagatactagacgcaacagatctagctcattcagaa
gatatgcaaaaacagatacttgatgatttgaaaaaggacttctgtaaagaaccaacatat
tgggactggctggcaagactggaaatgtttggtcttaaaaacgtggagaaggtttcagaa
ggaatgatctctgatcgtgtacgtgaagcaattcaggtatatgaggagggtttaaaagtt
gtgccctcagccacgatgtttgaactttatgtgaagttcttgacagatgccatcccttgt
ggaaatggagatggtaaatcttctgataactcaagcaatcatgttggtgatcccattgca
cagctgttgatggtatatgagaaggctgaaagcatggggtgcatcactgaagctcttgct
tgtcaacatgtttctttccttttgcaactgggaaagcaagttgaagccaagacactggta
gaaaagttttgtacaggaaaattttctgaagcagtgcatttatgggcattacggctctcc
atagaaatgatgtgcactgaaaatgggttctcttcaaacaaggctgctctgttatcattc
tttgaactccttaggaatgttctaatgaaggtttctatatcaaaagcagaaaacttgtgg
cttatggcactcaaggttttttcaagtcataaacagatttttgacaaactgatagatact
gcggtggctttattggctaaagatggtggaagtgatggtggattttcgctctcttctgcc
attgtaaattatgttctacagaaggatggacttcgcagtgcaagagagatgtacaggaga
tttatcgcactaccacacccaggactgtcaatatataagaattgcattgaattggaattg
agcattgtgtccactggtgatgagggttctcttgcaaatgcccgctcactatacgatgct
atgctgacaacatatgaccaagatgcaaacttgtggcgagactactactctatggaggtt
aagtttggaacattggaaaaagcagcagcagtcgaatggcgtgcacgaaaaacactcaac
aaaggcttcccactactctcaacggtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system