KEGG   Ipomoea nil (Japanese morning glory): 109172744
Entry
109172744         CDS       T04663                                 
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109172744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ini03009]
    109172744
Ribosome biogenesis [BR:ini03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    109172744
SSDB
Motif
Pfam: WD40 Utp12 NBCH_WD40 ANAPC4_WD40 WD40_like RMC1_N Nup160 WDR54 PROPPIN CDtoxinA Rhamnogal_lyase
Other DBs
NCBI-GeneID: 109172744
NCBI-ProteinID: XP_019177533
Position
Un
AA seq 943 aa
MVKAYLRYEPAETFGVIASIESNITYESSGKHLLAAALEKVGVWHTRQGICTKSLAPSPS
SSSKGPSLAVTSIAASPSTFIASGYADGSIRIWDCDKGACETSLNGHKGAVTALRYNKIG
SLLASGSKDNDVILWDVVGEAGLFRLRGHRDQVTDVLFLDSGKKLVSSSKDKFLRVWDLD
TQHCMQIISGHHTEIWSIDVDPEEKYLVTGSADPELRFYTIKHDAAADNPVADTSTTQSK
WEFLQPFGEIQRQSKDRVATVRFNKQGNLLACQHAGKTVEIFRVLDESESKRKAKRRINR
KEKKILKGGVAPDENGDANVGIQEEGKAPVITVLDVFKLLQTLRAGKKICSISFCPVASK
GSLATLALSLNNNSLEFYAIESDTATKTSSIELQGHRSDVRSVTLSSDNTLLMSTSHSEI
KIWNPSTGSCLRTIESGYGLCGLFLPGNKYAVVGTKGGTLEIIDVRSGTCIDVVEAHGGS
VQSIAATSDGTGFVTGSADHDIKFWELQTTQKPGQESKHITASPVRNLKMNDDVLVVSVS
PDGKYIAAALLDSTVKVFFMDSLKFFLSLYGHKLPVLCMDISSDGDLLVSGSADKNLKIW
GLDFGDCHKSIFAHADSVMGVKFVRNTHYMFSVGKDRVVKYWDADKFELLLTLESHHAEI
WCLAVSNRGDFFVTGSHDRSIRRWDRTEEPFFIEEEKEKRLEEMFESDIDNALENRYGPK
DELPEEGAVALAGKRTQETLTATDSIIEALDMADVEAKRIVEHEEEKSKGRIVDFQPNIL
MLGLSPSSYVLRAVSNVHTNDLEQTLLALPFSDALKLLSYLKDWASIPDKVELVCRMTTV
LLQLHHNQLVSTVSARPLLTLLKEVIPARVKECKDTLGFNLAAMDHLKQMMALKSDALFQ
DAKTKLLEIRSRNTKRIEARTELKDEKRKKKKQKKSDGGHVWS
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggtgaaggcatacctccgatacgagcctgcagagacatttggggtgatagcatccatt
gagtcaaatatcacctatgaaagctccggaaaacaccttctagcggcagcactggagaag
gttggtgtttggcacacgcggcaaggcatctgcaccaaatccttagctccttcgccttcg
tcctcttcgaaagggccatcccttgccgttacctccattgcagcatcaccttcaactttt
attgcgagtggttatgccgatgggagtataagaatatgggattgtgataaaggagcttgt
gaaaccagcttaaatgggcataaaggagctgtaactgctcttcgctacaataaaattgga
tctcttcttgcatcagggagcaaagataatgatgtaatcttatgggatgtagtcggtgag
gctgggttatttcgacttcgtggacatcgtgaccaggtcacagatgttcttttcttggat
tctgggaaaaaattggtcagttcttctaaggacaagtttttgagagtatgggaccttgac
actcagcactgcatgcagattattagtggccatcatactgagatttggtctatagatgtt
gaccctgaagaaaaatatctggttactgggtctgcagatccagagctacgattttataca
attaagcatgatgctgctgctgataatcctgtagctgacacttctacgactcaaagcaaa
tgggaattcctgcagccatttggtgaaattcaacgacagagcaaggacagggttgctact
gtaaggttcaacaagcaaggaaatctactggcttgtcaacatgctggaaagactgtagag
atatttcgtgtgctggatgaatctgaatctaagcgcaaagcgaaaagaagaatcaataga
aaggagaaaaaaatattaaaagggggggtcgcaccagatgaaaatggagatgcaaatgtt
ggaattcaggaagaaggcaaggctcctgttattactgtccttgatgtttttaagcttcta
cagactctgcgagctggaaagaaaatatgctcaatttccttttgcccagttgcttctaag
gggtcactggctactttggcattgtctttgaacaataattcgttagaattttatgcaatt
gaaagtgacacagcaaccaaaactagtagtattgagctccaagggcatcgttctgatgtg
agaagtgtcactcttagttctgataacactcttttaatgtcaacaagtcatagtgaaatt
aaaatatggaaccctagtactggttcatgcctccgtaccattgaatcgggatatggatta
tgtggtctatttcttcctggcaacaaatatgcagttgtaggtacaaaaggtggaacttta
gaaattattgatgttaggagtggtacttgtattgatgtggtggaagctcatggtggttca
gttcaatctattgctgcaacttcagatggaactggttttgttactggtagtgccgaccat
gacattaaattctgggagttgcagactacacaaaagcctggtcaggagtctaagcatatt
actgcctctcctgtgaggaatttgaaaatgaatgatgatgttcttgttgtttctgtgagc
cctgatggtaaatacattgctgctgcacttttggatagcacagtcaaggtgttcttcatg
gattctctcaaattttttctttcattatatggccacaagttacctgtgctatgtatggat
atttcttctgatggagatttacttgttagtggctcggctgacaaaaatttgaagatttgg
ggtttggattttggggactgtcataagtccatctttgctcatgctgatagtgtcatgggt
gtgaagtttgtgcgcaatactcactatatgtttagtgtgggtaaagatcgtgttgtgaaa
tactgggatgctgacaaatttgagttgcttttaacacttgaaagtcaccatgctgaaata
tggtgtctggcagttagcaatcgtggggatttttttgtaacaggttcccatgaccgttcc
atacgccgctgggatcgtactgaagaaccatttttcattgaggaagagaaagagaaaagg
ttggaggagatgtttgaatctgacattgacaatgcattagagaatagatatggaccgaag
gacgagcttccagaggagggagctgtggcattggcaggaaagaggactcaagaaaccctc
actgcaacagactccattattgaagcattagacatggcagatgtagaagcaaagcgcatt
gttgaacatgaggaggagaaatcaaaaggcagaattgttgatttccagccaaatatcctt
atgcttgggctatctccatcttcttatgttcttcgtgcagtttcaaatgttcacactaat
gatttggagcaaaccttactggcactgccattctctgatgcactgaagcttttgtcttac
ttgaaggattgggcctctatacctgataaggtggagcttgtatgccggatgaccaccgtg
ttgttacaactgcatcataaccagcttgtttcaactgtctctgctagaccgctactaacc
cttctaaaagaagtaatccctgcaagagtcaaggaatgcaaagatacacttggcttcaat
ctggcagcgatggatcatctcaagcaaatgatggctttaaagtcggatgcactcttccaa
gatgcaaaaactaaactattggaaatacgttctcggaacacaaaacgcattgaagcaagg
acagaactaaaggacgagaaaaggaaaaagaagaagcagaagaagtctgatggaggacat
gtttggtcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (49)   

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