KEGG   Ipomoea nil (Japanese morning glory): 109173124
Entry
109173124         CDS       T04663                                 
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a-like
  KO
K14563  rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109173124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ini03009]
    109173124
Ribosome biogenesis [BR:ini03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    109173124
SSDB
Motif
Pfam: Fibrillarin GCD14 FtsJ Methyltr_RsmB-F Methyltransf_31 PCMT
Other DBs
NCBI-GeneID: 109173124
NCBI-ProteinID: XP_019177929
Position
Un
AA seq 312 aa
MVARGRGGGGGGFRGGRGDGGRGGRGGRGGFGGGRGGGSDMKRGGGRGGGRGGGRGGGRG
GGRGRGGMKGGSKVVVEPHRHEGVFIAKGKEDALVTKNMVPGESVYNEKRIAVQNEDGTK
VEYRVWNPFRSKLAAAILGGVDEIWIKPGARVLYLGAASGTTVSHVSDLVGPTGVVYAVE
FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS
YFLKSEGHFVISIKANCIDSTVPAEAVFAQEVKKLQAEQFKPSEQVTLEPFERDHACVVG
GYRMPKKQKPAA
NT seq 939 nt   +upstreamnt  +downstreamnt
atggttgccagaggtcgtggaggtggcggtggtggttttaggggtggccgaggagatgga
gggagaggcggaagaggaggtagaggaggattcggcgggggaagaggtggtgggagtgac
atgaagcgcggcgggggaagaggcggcggtagaggtggtggtagaggtggtggaagaggt
ggaggaaggggacgtggaggaatgaagggtggtagtaaggttgtggtggagcctcataga
catgagggagtgttcattgccaagggtaaagaggatgctcttgtaactaagaatatggtc
cctggtgaatctgtctacaacgagaagaggattgctgttcagaacgaagatggaaccaag
gttgagtacagagtctggaatccttttaggtccaagttggcagctgctattcttggaggt
gttgatgaaatttggattaaaccaggtgcacgagtactctatcttggagctgcttccgga
acaacagtctctcacgtgtctgaccttgttggccctactggggttgtctatgctgtggag
ttttctcacagaagtggtagagatttggttaacatggcaaaaaagcgcactaatgttata
cccatcattgaagatgccagacatcctgcaaaatacaggatgttggttggtatggttgat
gtgatattttctgatgttgctcaacctgatcaggcaaggattttagcactgaatgcctcc
tacttcttgaaatctgaaggtcattttgtcatttccatcaaggcaaactgcatcgattca
actgtaccggctgaagcagtatttgcacaagaggttaagaagctgcaagcggagcaattc
aagccgagcgagcaggtgactcttgaaccatttgagcgagaccatgcttgtgttgttggg
ggttacaggatgcccaagaagcaaaagcccgccgcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (47)   

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