KEGG   Isosphaera pallida: Isop_1352Help
Entry
Isop_1352         CDS       T01407                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ipa  Isosphaera pallida
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ipa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Isop_1352
Enzymes [BR:ipa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Isop_1352
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Isop_1352
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1947120..1947986)
Genome map
AA seq 288 aa AA seqDB search
MPELPEVETMARGLRPTLTGAKLGQVEVIDPKLLEGSGMSADRFVERVSESVVSHVGRRG
KWLVWTLAGQRGLVVIQPRMTGGFWLIEPDRPHHVRILFPLPELGKTVWLTDARRLGRVL
WFADQTQASAAFARSHGPDALEIERDDLAARLARTARGLKPTLMDQKVLAGIGNIYADEI
CFAARIHPEIPANTLSARQVDRLHAAISAILLRAIQAEGSSFDAGYRTVLGLEGGFLAEN
AMYGRGGQPCPGCGEPILKTRIAGLIGRPTYFCPICQPPPVPQTMRQR
NT seq 867 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaattgcccgaagtcgaaacgatggcgcgagggcttcgcccgaccctgaccggg
gcgaagctggggcaggtcgaagtgatcgaccccaaactgttggaggggtcggggatgtcg
gccgatcggttcgtcgagcgtgtctcagagtcggtggtgtcccacgtgggtcgtcgcggc
aaatggctggtctggacgctcgctgggcaacgtggtttggtggtgatccagccccggatg
acggggggcttctggttgattgaaccggatcgtccccaccatgtccgaatcctcttcccc
ttgcccgaactcggcaagacggtgtggctgaccgacgcccgacgattgggccgggtcttg
tggttcgccgatcagacccaggcgagcgctgccttcgcccgctcccacggacccgacgcc
ttggagattgaacgcgatgacctggccgctcgtctagcacggactgccagaggccttaaa
cccaccttgatggaccagaaagtcttggccggcatcggcaacatctacgccgatgaaatc
tgtttcgccgcccggattcaccccgagatccccgccaacacactcagtgctcgtcaagtc
gatcggttgcacgcggcgatttccgccattctgctgcgcgcgattcaggccgaggggtcc
agtttcgacgccggttatcgaactgtgctgggtttggaggggggattcctcgccgaaaat
gccatgtacggccgaggcggtcaaccttgtcctggttgtggtgagccaattctcaagacc
cggatcgctggtttgatcggtcggcccacctatttctgccccatctgccaaccgcccccc
gtccctcaaactatgcgccaacggtga

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