KEGG T01407: Isop

Isosphaera pallida: Isop_2715

Entry

Isop_2715 CDS T01407

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ipa Isosphaera pallida

Pathway

ipa03410	Base excision repair
ipa03420	Nucleotide excision repair
ipa03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ipa03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ipa03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ipa03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

320104241

NCBI-GeneID:

10156852

UniProt:

E8R0F1

Position

3928839..3930668

AA seq 609 aa
MKEFAALYLELDATTRTLDKIAALKRYLQKSEPADAAWAVFFLTGRTLPKVVGSGRLRQW
AAQEAGIEPWLFQECYDAVGDLAETIALILPPPTQRREEPLRWWVETMLEPLRDRDEEEK
CRAVIEAWRSLDASERFVWNKLLTGAFRVGVARRLVVRALAETLAIAPDVMEHRLMGPWR
PEPEFFTRLTQTEGEEAQTAARVRPYPFCLAHALETASALLASPLGRNDPVGLIQAALGP
VDQWVAEWKWDGIRGQWIKRQGVHALWTRGEELVTDRYPELAAIADRLPDGLVLDGELLP
WRDNRPLAFGVLQTRIGRKHVTKSVLKTAPVIFLAFDLLEWDGEDWRERPLEQRRARLAE
VVARVDRAELLRLSPQVEASSWEELALRRAEARQHGAEGLMLKRRGSPYRVGRVKGDWWK
WKVDPLTIDAVLVAAQRGSGKRASLYSDQTFAVWDDQGRLVPIAKAYSGLDDHELKEVDA
WIRAHARESFGPVRSVEPVLVFELGFEGLQRSSRHKSGVATRFPRILRWRRDKRPEQADN
LATLLALLPPEPASPTKAGPVSQTRARVENQPRPALARSRSRIAPPVVRPLFNLDDPEQV
EGTEPPRSS

NT seq 1830 nt +upstreamnt +downstreamnt
atgaaggagttcgccgcactctatcttgagttggatgccaccacccgcacgctcgacaag
atcgccgcgttgaagcgttaccttcagaagtccgagccggccgacgcggcctgggcggtt
ttcttcctaacaggacgcacattgcctaaggtggttggttcgggtcgcctgcgccagtgg
gctgcccaggaagccggcatcgagccttggttgtttcaggagtgttatgacgccgtaggc
gacctcgctgaaaccatcgccttgatcctgccgccaccaacccagcgccgtgaggaacct
ctacgctggtgggtggagaccatgctggagccgttacgcgaccgcgacgaggaggagaag
tgtcgggcggtgatcgaagcctggagaagtctggacgcctccgagcgattcgtctggaac
aagttgcttaccggagccttccgggtcggcgtcgcgcggcgattggtggtccgggctttg
gccgaaaccctcgccatcgctcccgacgtgatggaacatcgcttgatgggtccgtggcgt
cccgagccggagttcttcactcgcctcacccaaaccgagggcgaggaggcccagaccgcg
gcccgagtccgaccttatccattctgtttggcccatgcgttagaaacggcctcggcgttg
ttggcttcgcctttgggacggaacgaccccgttgggctcatccaagcggcgcttggtcca
gtcgaccaatgggtggcggaatggaagtgggacgggattcgcggccagtggatcaagcgg
cagggagtccacgcgctttggacacgcggcgaggagttggtcaccgaccgctatcccgaa
ctcgcggcgattgccgatcgcctgcccgacggtttggtgctggacggtgaactgcttccc
tggcgggacaatcgaccccttgccttcggcgtgcttcaaacgcgaatcggccgtaagcat
gtcaccaagtcggttctgaagaccgcgccggtgatctttctggcgttcgacctgttagag
tgggatggcgaggactggcgggaacgtcctttggaacaacgtcgcgcgcggttggctgag
gtggtcgcgcgagttgatcgtgccgagctgttgaggctctcgcctcaagtggaggcgtcc
agttgggaggagttggccctccgacgggccgaggcccgccaacatggtgccgaggggctg
atgctcaagcgtcggggttcgccttatcgggtaggacgggtcaaaggggattggtggaag
tggaaggtggatccactcacgattgacgcggttttggtggcggcccaacgcggcagcggc
aagcgggccagtctctactccgaccaaaccttcgctgtgtgggacgaccagggccggctg
gtcccaatcgccaaagcgtattccggtctcgatgatcacgaacttaaagaggtggacgct
tggattcgcgcgcacgcgcgcgagtcgttcggaccggtgcgctcggttgaaccagtcttg
gtgttcgagttggggtttgaggggttgcagcgctccagccggcacaagtcgggcgtagcg
acccgattcccccgcatccttcgctggcgtagggacaaacggcccgaacaggccgacaac
ctggcgacactccttgcgctgttgccaccagaacccgcgtcaccaaccaaagccgggccg
gtttcccaaacccgggcccgggtcgagaaccagccccgtcccgctctcgcacggtcccgg
tcccgaatcgcgcctccggtggttcgtcccctgttcaaccttgacgaccccgagcaagtc
gagggaacggaaccaccccgctcgtcgtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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