KEGG   Ictalurus punctatus (channel catfish): 108255780
Entry
108255780         CDS       T04658                                 
Name
(RefSeq) vesicle-associated membrane protein 3
  KO
K13505  vesicle-associated membrane protein 3
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04130  SNARE interactions in vesicular transport
ipu04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    108255780
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108255780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108255780
Membrane trafficking [BR:ipu04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    108255780
SSDB
Motif
Pfam: Synaptobrevin RIFIN Mobilization_B DUF2207_C TMEM_230_134 DUF6548 DUF2721 EMP24_GP25L DUF5305 UL45 ECSCR DUF6584 LRR19-TM SHE3 DUF4519
Other DBs
NCBI-GeneID: 108255780
NCBI-ProteinID: XP_017307475
UniProt: A0A2D0PQW4
Position
22:complement(2441080..2444399)
AA seq 103 aa
MEKGKGQLQQLQEDADQVVVIMQKNFNKVGEREEKLEELDKRADALLETGKQFRKSTRKL
KQKTETENARLRCKNWRVIAGVVALIIIITIVIIIIIAVLWPR
NT seq 312 nt   +upstreamnt  +downstreamnt
atggagaagggaaaaggccagctgcaacagcttcaggaggatgcggaccaggttgtggtc
atcatgcagaagaacttcaacaaggtcggagagcgtgaggaaaagctagaggaactggac
aagagagctgatgcgctgttagagactggcaagcagtttcgaaagtcaacaaggaaactg
aaacagaagacggaaaccgagaacgccagattgcgatgtaagaactggagggtgatcgct
ggagtagttgctctgatcatcattatcaccattgtcatcattatcatcattgcagtattg
tggccgcggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system