KEGG   Ictalurus punctatus (channel catfish): 108255839
Entry
108255839         CDS       T04658                                 
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
  KO
K04572  neurofilament light polypeptide
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ipu01009]
    108255839 (zgc:65851)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108255839 (zgc:65851)
Protein phosphatases and associated proteins [BR:ipu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108255839 (zgc:65851)
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type IV
     108255839 (zgc:65851)
SSDB
Motif
Pfam: Filament Filament_head BCDHK_Adom3
Other DBs
NCBI-GeneID: 108255839
NCBI-ProteinID: XP_017307609
Ensembl: ENSIPUG00000017157
UniProt: A0A2D0PNL4
Position
22:19271563..19280840
AA seq 564 aa
MSFHSDVYSTSSYRKFFGDSSRVSAPPLRSSSGYRVYGGGYRGRVHAGLSSSAPDAADLA
HTAASATELKIVRTNEKEQLQGLNDRFAAFIERVRELEQHNRALEAEAESLRRSLGSEPA
RLRDLYEHELRELRERADQLERDRSRAQLENAHLGEALARAQEKLHEESRLRDEAERELQ
RCRKEAEDGALHQIELQKRVESLLHEIDFARKVHDEEVRELQASLQASQISVEMDVSKPD
LTVALKDIRAQYEVLSSRNQQQAEDWYRSKFASVTQATSRDTDAIKHTRDELSACRRQVQ
ARTLEIDALRNHNDALERQLAEMEDRHSTELGEMQETIAQLEDALRSTKGEMSHHLREYQ
DLLNVKMALDIEIAAYRKLLEGEETRLGSVGVTTVHPAYSAVSYSVGRAYTLGAYRRDVA
KPESEEEEDEKEAEEKEEEEVEEEEEEEGGEEEEEEEAAEEEGGDEEEEEEEKGGEDEEE
EGGDEREEGAEGDQVEEEEVVEVEKKEKKEQEEEKKEMKEQVEEKKKDKVMEKEKEKKSE
DKGDEAKAESKAEKTESSKGDKSK
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgagtttccatagcgacgtttactccacgagctcctaccggaagttcttcggggactcc
tctcgggtgtccgctcccccgctccggtcctcgtcgggttaccgggtttacggaggcggt
taccggggccgcgtgcacgccggtttgtcctcctcggcgccggacgcggcggatctcgcg
cacacggcggcgtcggccaccgagctgaagatcgtgcgcaccaacgagaaggagcagctg
cagggtctcaacgaccgcttcgctgccttcatcgagcgcgtgcgcgagctcgagcagcac
aaccgcgcgctcgaggccgaggccgagtcgctgcgccgcagcctgggctccgagcccgcg
cgcctgcgcgacctctacgagcacgagctgcgcgagctacgcgagcgcgccgaccagctg
gagcgcgaccggagccgcgcgcagctcgagaacgcgcacctcggcgaggcgctcgcgcgc
gcccaggagaagctgcacgaggagagccgcctgcgcgacgaggccgagagagagctgcag
cgctgccgcaaggaggcggaggacggagcgctgcaccagatcgagctccagaagagggtg
gagtcgctgctgcacgagatcgacttcgcgcggaaagtgcacgatgaagaagtgcgcgag
ctgcaggcttcactgcaagcctctcagatatctgtggagatggacgtgagtaaaccggat
ctcaccgtggctctgaaggacatccgggcgcagtacgaggttctgtcctcgcggaaccag
cagcaggcggaggactggtaccgctccaagttcgccagcgtgacccaggcgacatcacgc
gacaccgacgccatcaaacacaccagggatgagctgagcgcatgccgacgccaggttcag
gcgcgtacgctggagatcgacgccctacgcaatcacaacgacgcactcgagcggcagctg
gccgagatggaggaccgccacagcaccgagctcggagagatgcaggagacgatcgctcag
ctagaagacgctctgcgcagcactaaaggagaaatgtctcatcacctgcgcgagtatcag
gacctgctgaacgtcaagatggcgttggacatcgagatcgccgcctacaggaagttgctg
gaaggcgaagagacccgtctgggcagtgtgggcgtgaccacagtccatcccgcctactct
gctgtttcctattcggtgggacgcgcttacaccctgggtgcctacaggagggacgtggcc
aaacctgagagtgaggaggaagaggacgagaaggaagcggaggagaaggaagaggaggaa
gtagaagaagaagaagaagaagaaggaggagaagaagaagaagaagaagaagcagctgag
gaggaaggaggagatgaagaggaggaggaggaggagaagggaggagaggatgaagaagaa
gaaggtggagatgaaagagaagaaggagcggaaggagaccaggttgaggaagaggaggtg
gtggaggtagagaagaaagagaagaaggagcaggaagaagagaagaaggagatgaaggag
caggtagaagagaagaagaaggacaaggtgatggagaaagagaaagagaagaagagcgaa
gacaaaggggatgaggctaaggccgagagcaaggcagagaaaaccgaaagcagtaaagga
gacaagagcaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (68)   

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