KEGG   Ictalurus punctatus (channel catfish): 108256388
Entry
108256388         CDS       T04658                                 
Symbol
pld1b
Name
(RefSeq) phospholipase D1
  KO
K01115  phospholipase D1/2 [EC:3.1.4.4]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu00564  Glycerophospholipid metabolism
ipu00565  Ether lipid metabolism
ipu01100  Metabolic pathways
ipu04144  Endocytosis
ipu04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09100 Metabolism
  09103 Lipid metabolism
   00564 Glycerophospholipid metabolism
    108256388 (pld1b)
   00565 Ether lipid metabolism
    108256388 (pld1b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108256388 (pld1b)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    108256388 (pld1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108256388 (pld1b)
Enzymes [BR:ipu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.4  phospholipase D
     108256388 (pld1b)
Membrane trafficking [BR:ipu04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Phospholipases
    108256388 (pld1b)
 Endosome - Golgi transport
  Others
   Others
    108256388 (pld1b)
SSDB
Motif
Pfam: PLDc PLDc_2 PX PH DUF3785
Other DBs
NCBI-GeneID: 108256388
NCBI-ProteinID: XP_017308689
Ensembl: ENSIPUG00000017378
UniProt: W5UIR9
Position
23:complement(9630028..9672830)
AA seq 1036 aa
MSQQDLVTASTLQLVATDMTEIMENLDTRELDIGEGEDEFEGPGANSAEARIPFSVIYKM
KGFKEPEAQVFLTSFPITAKILEVERFACAQDRFNITNQRSVSKKLPAVFRIEMRHGNFT
WIVKRKEKHFMELHRELRTYKAFLKIPIPTRTHTERRQTVRYTRQMPTLPRGGGDELARE
EQVSSRKRQLEDYLNKLLKMPLYRNYHATMEFIEASQLSFIHDLGPKGLEGMVYKRSGGH
RIPGLNCCGHSKVCYRWSKRWLVVKDSFLLYMKPDSGSISFVLLVDKEFCVKMDSKDTET
KHGIRVDSLCRNLVLKFSSFRHARWWGQAIDDFVHKYGSAFLQDHRFGSFANVQENIPSK
WYVNGKTYMEDVATALEAAEEEIFITDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQKGV
RIFVLLYKEVELALGINSEYSKRTLHQLHPNIKVMRHPDHVSSSVYLWAHHEKLVVIDQS
VAFVGGIDLAYGRWDDREHRLTDVGSVTRTLNTSAENVTEASLSMASPSNGPVQSNGKNS
GRDLEDQPKLRGHGKTRKSRFSIRKRLQRHGLVHGDSVSSAESSEENAESAQDLQADVIG
LMGNTRFWHGKDYCNFVHKDWIQLDKPFDDFIDRHITPRMPWHDIASVVHGKAARDVARH
FIQRWNFTKIMKPKYRSYPYLLPKSHTTATEIKHQVPGCVHTKVQVLRSASDWSAGIKYH
EESIHNAYVHVIENSKHYIYIENQFFISCADNKLVYNKIGDSIAQRIIKAYREGTKYRVY
VVTPLLPGFEGDINTGGGSALQAIMHFNYRTMVRGEHSIMSQLKKEMGDLWMNYISFGGL
RTHAELEGKLVTELIYVHSKMLIADDNTVIIGSANINDRSMLGKRDSEVAVIYEDTETET
SVMDGQEYQAGRFGLQLRLECFRTILGAHTDSSIDISDPISDHFYKEVWMTTAARNATIY
QKVFRCLPSSDVRTSLELEGFLSKSGLDKDDPLKAQEELHKIRGFLVHFPLYFLSEQNLL
PPIGSKEAMVPMEVWT
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgtcgcagcaggacctagtcacagccagcacactgcaactggtggccacagacatgact
gaaatcatggagaacctcgacacacgtgagctggacatcggagagggcgaggatgagttt
gaaggaccaggagctaacagtgcagaagctcgtatcccattctctgttatctacaagatg
aagggatttaaagaaccggaagctcaagtgttcctcacgtcatttcccattactgccaaa
atcctggaggtggagcgctttgcctgtgctcaggaccgcttcaacattaccaatcagagg
agtgtgtcgaagaaacttcctgcagttttccggattgagatgagacacgggaacttcacc
tggatagtgaagcggaaggagaagcacttcatggagctgcacagagagttacggacctac
aaagccttcctgaagattcctatacccactcgcactcacacggagcggaggcagacggtc
agatacacacgacagatgcccacgttaccgcgtggcgggggagacgaactcgcgcgagag
gagcaagtgtccagccggaagcgccagctcgaggattatttaaacaagctgctgaaaatg
cctctgtacagaaactaccatgccaccatggagttcattgaagcgagtcagctgtccttc
attcatgatttgggaccaaaaggcttagagggcatggtgtataaaaggtcaggaggtcac
cggattcctggactcaactgctgcggccacagtaaagtctgttaccgctggtccaaacgt
tggttggtggtgaaagattctttcctgctctacatgaagcccgactccggcagcatctcc
ttcgtcctcctggtggataaagagttctgtgtgaaaatggactctaaagacacggagaca
aaacacggcattcgcgtggacagtttgtgcaggaacctggttctaaagttctccagtttc
cgtcacgcccgctggtggggtcaggccatcgacgactttgtgcacaaatacggcagcgcc
ttcctccaggaccatcgctttggttccttcgccaatgtgcaggagaacatcccctccaaa
tggtatgtgaacggtaaaacgtacatggaggacgtagctacagcactggaggcagctgag
gaggagatcttcatcacagactggtggctgagtccggagattttcctcaaaaggccagtt
gttgaaggaaatcgctggcgtctggactgcattcttaaacgcaaagctcaaaaaggagtt
cggatatttgttctgctctataaggaagtggagctcgcgctcgggatcaacagtgaatac
agcaagaggacgctgcaccagcttcaccccaacatcaaggtgatgcgacatcctgaccat
gtctcctcctccgtctatctgtgggctcatcatgagaagcttgtggtaatcgaccaatct
gtggcgtttgtgggtgggattgatttggcgtacgggcgctgggacgatcgagaacaccgg
ctaacggacgtggggagcgtgacgagaaccctcaacacgtctgcagagaacgtaacggaa
gcgtctctctccatggcgtctccttcaaacggtccagtacagagtaacggcaaaaactcc
ggcagggatttggaagatcagcccaagctccgaggtcatgggaaaaccaggaaaagtcgc
tttagtatcaggaaacgcctgcagagacacgggctggtgcacggcgacagtgtgagcagc
gccgagagctccgaggaaaacgcagaatcggctcaggacctgcaggccgacgtcattggt
ctgatggggaacacgcggttctggcacggcaaagattactgtaactttgtgcacaaggac
tggatccagctggacaaaccgttcgatgatttcatcgacagacacataactcccagaatg
ccatggcacgacatcgcctcggtggttcacgggaaagctgcgagagacgtcgcgaggcac
tttattcagcgctggaatttcaccaagatcatgaaaccgaagtaccggtcatacccgtac
ctcctccccaaatcccacaccaccgccaccgagatcaagcaccaggtcccgggctgcgtt
cacactaaagttcaggtgttacgatctgcgtctgattggtccgctggtataaagtaccat
gaagagtccatccacaacgcctacgtccacgtgatcgagaacagtaaacactacatctac
attgagaaccagttctttataagctgcgctgataataagctcgtctacaataagatcgga
gactccatcgctcagaggatcatcaaagcctacagggagggtacgaagtaccgtgtgtat
gtcgttactcctctcttacctggatttgaaggagacattaataccggaggaggaagtgcc
ctccaggccatcatgcacttcaactacagaacgatggttagaggagaacattctatcatg
tcgcagctgaaaaaagagatgggagatctgtggatgaactacatctcattcgggggactg
aggactcacgctgaactggagggaaaactggtgactgagttaatttatgtccacagcaaa
atgctcatcgcagacgacaacacggtcatcatcggttcggcgaacattaatgaccgcagt
atgttgggaaagcgggacagtgaagtggctgttatttacgaggacacagagactgagacg
tctgttatggacggacaggaatatcaggcaggacgtttcggactgcaactccgtctggaa
tgttttaggacgatcctcggcgctcacacagactccagcatcgatatctcagaccccatc
agtgaccatttctacaaggaggtgtggatgaccactgcagctcgcaatgccaccatctac
cagaaggtgttccgctgtttgccgtcaagtgatgtgaggacaagcctggagctggaagga
tttctgtccaagtccggtttggataaagatgatcctctgaaagctcaggaggagctccat
aaaatccgaggcttcctcgtccattttcctctctacttcctgagcgagcagaaccttctc
ccacccatcggttctaaagaggcaatggtacccatggaggtgtggacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (60)   

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