KEGG   Ictalurus punctatus (channel catfish): 108257280
Entry
108257280         CDS       T04658                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF19A isoform X3
  KO
K11972  E3 ubiquitin-protein ligase RNF19A [EC:2.3.2.31]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108257280
Enzymes [BR:ipu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     108257280
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    108257280
SSDB
Motif
Pfam: IBR zf-C3HC4 zf-RING_5 zf-RING_2 Rtf2
Other DBs
NCBI-GeneID: 108257280
NCBI-ProteinID: XP_017310398
Ensembl: ENSIPUG00000010824
UniProt: A0A2D0PV42
Position
24:21024733..21045122
AA seq 749 aa
MSLNHHQTQDSERDLPSSSSVRKTPKKRGISLRSIFRRRRLDTKSRKSRALASGVDGIAS
VENVVQSEMQQQQQQQQQEVASTSSSASSTSSEFLECPLCLLRHARDRFPDIMTCHHRSC
ADCLRQYLRIEISESRVNISCPECSERFNPHDIRMILGDRALMEKYEEFMLRRWLAADPD
CRWCPAPDCGYAVIAFGCASCPKITCGREGCGTEFCYHCKQLWHPNQTCDAARQQRAQSL
RLRPFRSSSLSYSQESGAAADDIKPCPRCAAYIVKMNDGSCNHMTCAVCGCEFCWLCMKE
ISDLHYLSPSGCTFWGKKPWSRKKKILWQLGTLVGAPIGIALIAGIAVPAMIIGIPVYVG
RKIHSRYEGKEISKHKRNLVIAGGVTLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLC
RSGGCGVSAGNGKGVRIEFDDENDMNVGGGAAATDSTSVAETRQNASIGGSVGGLTGSLS
ASGSHMERIGAMRDNVSENASTMALTGSLSGSTVGHCFNRLEVQADVQKERCSLSGESGT
VSLGTVSDNASTKAMAGSILNAYIPQDREGSSMEVQVDVESKLGKLRHHSGSSSMEEGST
GGRGICPSTCPHEGKYASGKKSKGKMRKKTGSTKINETREDMDAQLLEQRSTNSSEFDSP
SLSGSLPSVADSHCSHFSEFSCSDLDGSRPPNAISPLPEVENDRLENGPATRPLCSAPLS
PESSPKERNNNVAPQPSPPARNICIQTEI
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgagtctgaaccatcaccagacccaggactcggagcgggatcttccctcctcctcctcc
gtcagaaagacacccaaaaagcggggcatctcgctccgttcgattttccgaagacgccgt
ttggacacgaagtctcgcaaatcacgagcgttggccagcggcgtggacggcatcgctagc
gtcgagaacgtggtccagtcggaaatgcagcagcagcagcagcagcagcagcaggaagta
gcgtccacgtcatcctccgcctcctccacgtcttcagagttcctggaatgtcccctctgc
ctgctgcgccacgcccgagaccgcttccctgacatcatgacgtgtcaccatcgctcgtgt
gccgactgtctgaggcagtacctgcgcatcgagatctccgagagccgcgtgaacatcagc
tgccccgagtgctccgagcgcttcaacccccacgacatccgcatgatcctcggagaccgg
gccctcatggagaagtacgaagagttcatgctccgcaggtggctcgccgctgaccccgac
tgccgctggtgccccgcccccgactgcgggtacgcggtgatcgcgttcggctgtgcgagc
tgtccgaagatcacgtgcgggcgtgagggatgtgggacggagttctgttatcactgtaaa
cagctgtggcaccccaaccaaacgtgtgacgcggccagacagcaacgagctcagagtctg
agactgagacccttcagatcctcctcactgagctacagccaggagagcggcgctgcggca
gacgatataaagccctgcccacgctgtgctgcttacatcgtcaagatgaacgacgggagc
tgcaatcacatgacctgcgctgtgtgcggctgcgagttctgctggctctgcatgaaggag
atctccgacctgcactacttaagtccttcaggctgtacgttttggggtaagaagccgtgg
agccggaagaagaagatcctgtggcagttggggacgctggtcggcgcacccatcggcatc
gcgctgatcgccggcatcgccgtccccgctatgatcatcgggattccggtgtacgtgggc
aggaagatccacagccgctacgaaggaaaggagatctccaagcacaagaggaacctggtg
atcgccggcggagtcacgctgtcagtcatcgtctcgccggtggtggccgccgtaaccgtc
ggtatcggagtgcccatcatgctggcgtacgtgtacggcgtggttcccatctctctgtgc
cgcagtggagggtgtggcgtgtcggcggggaacgggaaaggagtgcgcatagaatttgac
gacgaaaacgacatgaacgtgggaggaggtgcagcggcgaccgactctacgtcggtggcg
gagacgaggcagaacgcgagtatcggaggcagcgtcggcggtctgacgggcagcctgagt
gccagcgggagtcacatggagcgaatcggagccatgagggacaacgtgagcgaaaatgcc
agcaccatggcgctcacaggaagtctgtcaggcagcaccgtgggccactgcttcaacagg
ctggaggttcaggcagatgtacagaaggagcgctgcagtctgagtggagagtccggcacg
gtcagtttggggacagtcagtgacaacgcaagcaccaaagccatggctggatccatcctc
aacgcctacatacctcaggacagagagggcagcagtatggaggtgcaggtggatgtggag
tctaaattggggaagcttcgacaccacagcggcagcagcagcatggaggagggcagcacc
gggggccgcggcatctgcccctcgacctgtccccatgagggcaaatacgcctcagggaag
aagagcaaaggcaagatgcgcaagaagacgggcagcaccaagatcaacgagacacgggag
gacatggacgcgcagctgctggagcagcgcagcaccaactcgagcgagttcgactctccg
tctctgagcggcagtctgccctccgtcgccgactcgcactgcagccacttctccgagttc
agctgctccgacctggacggctcccgaccccccaacgccatcagccctctccccgaggtg
gagaacgaccggctggagaacggccccgccacccggccgctctgctccgcccctctcagc
ccggagagctctcccaaagaacgcaataacaacgtggctcctcagccgagccccccggcg
cgtaacatctgtattcaaactgagatttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

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