KEGG   Ictalurus punctatus (channel catfish): 108258587
Entry
108258587         CDS       T04658                                 
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
  KO
K18494  [histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:2.1.1.355]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu00310  Lysine degradation
ipu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    108258587 (setdb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108258587 (setdb2)
Enzymes [BR:ipu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.355  [histone H3]-lysine9 N-trimethyltransferase
     108258587 (setdb2)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     108258587 (setdb2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108258587 (setdb2)
SSDB
Motif
Pfam: SET Pre-SET MBD PRDM2_PR
Other DBs
NCBI-GeneID: 108258587
NCBI-ProteinID: XP_017312790
Ensembl: ENSIPUG00000011157
UniProt: A0A2D0Q3C2
Position
26:8146493..8158177
AA seq 657 aa
MELSAVERAKTFWSQVDVDLAFEELLGFLMCLREAIKNKAASDKGYVQGMNIIMESEVSL
TAALRSDSFEEVLIGEGVIVGEDILTVSVSDSHCTILKMKDLPVPEDALHDDVSRNLESG
SDNSQMSSSGRNDAMLLGKLDTYDYMMLLSPANVLSDDQLAPVSPVQLSYQQHDCSPACL
PHLPSHSDTFLGHNPLQVPLLCHFQRHCAKPLMLSPHEELDSNVLYKAPCGRSLRRMDDV
YQFLQQTKSLGVLHQTNFSFNSQVLPERQAQPRPLAPASPLPTTSISERDISRGIESVPV
TLCNDLDGVRPKEFRYRKDRWPHGCFLSTAPFFLSCCDCTDGCTDSSSCLCLQLSLKAGA
KPDRLYSHHRLNEPVSTGLYECGPWCGCPKSSCQNRVVQHGLRVRLQVFRTNDKGWGVRC
RDDLDKGTFVCTYAGVVLRLGRNLEEPLLSKIQKEEQLSDDEVEVVEEWTLPSGQKKTVT
ETLDTSPRPYVLVIQRPADQPSAPLDGQREQLENSDNQEEMNTCSSPNPSHTEIKHQHKE
EVVRKRLRLDGEENGGDVRRDQMVPKPDCQEKMYYLDASKEGNVGRFINHSCNPNLFVQN
VFVDTHDPKFPVIAFFTCKPIRAGTELTWNYSYKTGSDPEHEVQCLCGSNDCQTIII
NT seq 1974 nt   +upstreamnt  +downstreamnt
atggagctgtcggctgttgagagagcgaagacattttggtctcaggtggatgtggacttg
gcttttgaggagctgttgggattcctgatgtgtctgagagaagctattaaaaacaaagct
gcctcggataaaggctacgtccagggcatgaacattatcatggagtcggaggtgtcgctg
actgcagctttgaggtctgattcctttgaggaggtgctgatcggtgaaggtgttatagtt
ggtgaagacatactgacagtgtctgtctcagactcgcactgcactatactgaaaatgaag
gatctacctgtgccagaagacgccttacatgacgatgtctcaaggaacctggagtccggt
tcagacaacagtcagatgtcttcatcaggtcgaaatgatgctatgttattagggaagtta
gacacgtatgactatatgatgctgctgtcgccagctaatgttttatctgatgaccagttg
gcccctgtgtcacctgtccagctttcctatcaacagcacgactgcagcccagcctgtctc
cctcacctcccgtctcactcggacacttttcttggccacaaccccttgcaagttcctctt
ctctgccacttccagcggcattgtgccaagccactgatgctttcaccacacgaggaactg
gactcgaacgtgctctacaaagccccgtgtgggcggagcttgcgccgcatggatgacgtg
tatcagttcttacagcagactaaaagcctcggggtcctgcaccagaccaacttcagcttc
aattcgcaggtactgccagagcggcaggcccagccaaggccgctagcccctgcttcacct
cttcccacaaccagtatttctgagagagacataagccgtgggattgaatctgtcccggtt
actctgtgtaatgacttggacggtgtacggccaaaagagtttcgctatcgcaaggatcgc
tggccccatggctgcttcttaagcacggcgccatttttcctgagctgctgtgactgcaca
gatggatgcacggacagttccagctgtttgtgtcttcagctgtctctaaaggctggcgca
aagccagaccggctttacagccaccaccggctaaatgagcctgtgtccaccgggctgtat
gaatgtggtccatggtgtgggtgcccgaaaagcagttgtcagaatcgtgtggtccagcat
ggactccgtgtccgcctgcaggtgtttcgcaccaatgacaagggatggggcgtgcgctgc
cgtgacgacctcgacaagggcacgttcgtctgtacttacgcaggtgttgtcctgagactc
gggcggaacttagaggagccgcttctctcgaaaatccagaaggaggagcagttgtcggat
gatgaggtggaggtagtggaggagtggacgcttccctcagggcagaagaaaacagtcact
gagaccctggacacctctccacgtccttatgttcttgtgatccagaggcctgcagaccag
ccctctgcaccgctggatggccagagggaacagctggagaattcggataaccaggaggaa
atgaacacctgttcatcgcctaatcccagtcatacagaaatcaaacaccagcacaaggaa
gaggtggtgaggaagaggcttcggttggatggcgaggaaaacggtggcgacgtacgtcga
gatcagatggtgcctaaacccgactgtcaggaaaaaatgtattatcttgatgcttcaaaa
gaaggaaatgtgggaaggtttattaatcacagctgcaatcccaacctctttgtccagaat
gtctttgttgatacccacgatcccaaattcccagtaattgctttctttacgtgcaagcca
atcagggcagggactgagctgacctggaattattcctataaaacaggaagtgatcccgag
cacgaggtccaatgtctgtgtggttcgaatgactgccaaacgattatcatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (59)   

Download RDF
DBGET integrated database retrieval system