KEGG   Ictalurus punctatus (channel catfish): 108258655
Entry
108258655         CDS       T04658                                 
Symbol
itga6b
Name
(RefSeq) integrin alpha-6b isoform X1
  KO
K06485  integrin alpha 6
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04510  Focal adhesion
ipu04512  ECM-receptor interaction
ipu04514  Cell adhesion molecules
ipu04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108258655 (itga6b)
   04514 Cell adhesion molecules
    108258655 (itga6b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108258655 (itga6b)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108258655 (itga6b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108258655 (itga6b)
   04515 Cell adhesion molecules [BR:ipu04515]
    108258655 (itga6b)
   04090 CD molecules [BR:ipu04090]
    108258655 (itga6b)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108258655 (itga6b)
  Exosomal proteins of breast milk
   108258655 (itga6b)
Cell adhesion molecules [BR:ipu04515]
 Integrins
  Integrin alpha subunits
   108258655 (itga6b)
CD molecules [BR:ipu04090]
 Proteins
  108258655 (itga6b)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 FG-GAP_2 DUF11 Integrin_alpha
Other DBs
NCBI-GeneID: 108258655
NCBI-ProteinID: XP_017312927
Ensembl: ENSIPUG00000022343
UniProt: A0A2D0Q3R1
Position
26:14608274..14643265
AA seq 1087 aa
MARYRTLTLSLLCLMECGFISAFNLDTENVIRKSGEPNSLFGFSLALHRQLVPTDKRMLL
VGAPRAKKLSNQKSQITGGLYNCDINTVSSACQRVDFDNDENLAQESKDNQWMGVTVQSQ
GPGGKIVTCAHRYQKRFFTNSPQESRDITGRCYVLSQELKINDEDEGGDWTFCAGRPRGH
ERFGSCQQGSSVTFTKDFHYIVFGAPGAFNWKGVVRMEQKNNTLFELGFYDDGPFEVKYS
TVEGLDEVAVPANSYLGFSLDSGKMLTKKGQLTVVAGAPRANHSGAVVLLRKESETGSTM
VTEYILEGEGLASSFGYELAVVDLNGDGWQDLVVGAPQFFVRHGDIGGAVYVYINRDGNW
NEATKTRIDGPKNSMFGLAIENLGDLNLDGFNDVAVGAPYDDEGAGSVYIYHGSSSGLNK
EPAQVLKGGNLNIKMFGYSIAGNMDLDNNQYPDVAIGSLSDTVVVYRARPVVNIEKTVTT
TPKEIDLTKKNCGDNICVQVSTCFKFTSNSKNYSPSLRIKYSIQVETKRKKQGLPSRAVF
VQPTSTDTDYESTGVMELKKQNEQKCVTKTLKLQDNLRDKLRALPIEVNVEILKPSAGRR
KRQIALTDLSPVLAASRPSVTEVNFLKEGCGSDLKCQSNLELEYKFCSRERNQDIFIPLP
VQKGVPVISLSHQQEIALEVTVTNKNGDDAYESVLTASFPDSLSYAAVRPNNVISCQANL
NGSKAECELGNPFKRDSKIVFYIVLSTGGISLDTTEVEVKLDLKTTSDQAPQIVTKKANV
VIELLLSLSGVAKPSQLEFSGTVIGESAVKSETDIGNQIDYEFRVINLGKPLKSFGTAFL
NIDWPKNTATKKWLLYLMKITTTGTDNVHCRPDEVNKLRLPRDPSLSRSKRETKDGGEST
GGDNGGVLSALFSDKRKSKVLTCDDGASCVKLKCPLQGLDSNAVIALRAHLWNGTFIEDF
SDMNYVDIVVNASLSLDNAPKNVLLTNKDTLVRVTVFPVRKAAQYGGLAWWVILVAILLG
LLLLGLLAFLLWKCGFFKRSKYNDSVPSYNAVRIKKEERRDPPGKEQPASVEKKQWMTTW
NENESYS
NT seq 3264 nt   +upstreamnt  +downstreamnt
atggcgcgttaccggacgcttaccttgtctctcctctgtttaatggaatgcgggttcatt
tccgccttcaacctggacacggagaatgtgatcaggaagagcggggagccgaacagcttg
ttcgggttctcactcgctctgcaccggcaactcgttccgactgataaaagaatgctgctc
gttggcgctcccagggcaaagaaactgtccaatcagaagtcacagataacaggaggcttg
tacaactgtgatattaacaccgtcagctctgcctgccagcgagttgatttcgacaatgat
gagaacctggcccaggagagcaaagataaccagtggatgggtgtcacagtgcagagtcaa
ggaccagggggcaagattgtgacgtgtgcccatcgctaccagaagagattctttaccaac
tcgccgcaggagtcccgggacatcacgggccgctgctacgttctcagtcaggagttgaaa
atcaacgatgaggacgagggaggagactggaccttctgtgcgggccgacccaggggtcac
gagcggttcggctcctgccagcaaggctcgtctgtcaccttcaccaaggacttccattac
atagtgtttggagcacccggagccttcaactggaaaggtgttgtacgcatggagcagaag
aacaacacgctgttcgagttgggtttctacgatgatggaccgtttgaggtcaaatacagc
acggtcgaaggactcgacgaagtggccgtccctgctaacagctatttaggattctctctt
gactctggtaagatgctgactaagaaaggtcagctgaccgtggtcgccggagccccgcga
gccaatcacagtggagctgtggttctactgaggaaggagtcagaaacaggttcgaccatg
gtcactgagtatatcctcgaaggagaaggactagcctcgtcttttggctatgaactcgca
gtggttgatttaaacggagatggatggcaggatcttgtagttggagcacctcagttcttt
gtgaggcacggtgacatcggtggcgctgtttacgtctacatcaatcgtgacggaaattgg
aacgaggccaccaaaactagaatagacggacccaaaaactccatgtttgggctggctatt
gaaaacctgggggatcttaacctggatggatttaatgatgtggctgttggggctccatat
gatgatgaaggagcaggaagtgtctacatctatcacggctcaagcagcggcctcaataaa
gaacctgctcaggtgctgaaaggaggaaacctgaacattaagatgtttggttactccata
gctggtaacatggatttagacaacaaccaatacccagacgtggccattggatctctctct
gacactgtggtcgtgtacagagcaaggccagtggtcaacatagaaaagacagtcaccacc
actcccaaagagatagacctcactaagaagaactgcggggacaacatttgtgttcaggtt
tccacctgtttcaaatttacctccaactccaaaaactacagccctagcctcagaatcaag
tactccatccaggtggagacaaagaggaagaagcagggtcttccatctcgtgctgttttc
gtccaacccacctccaccgacactgactatgagagcacaggagtcatggagcttaaaaag
cagaatgagcaaaaatgcgtcacaaaaacccttaaacttcaggataacttaagggataag
ctgagagccttgcccatagaggtgaatgtggagatcctgaagccgtcagcaggacgcagg
aagagacagatagccctcaccgatctgagtcccgtcctcgctgccagccgaccgagtgtt
actgaagtgaattttttgaaagagggctgcggcagtgacctgaagtgccagagtaacctg
gagctagagtacaaattctgctctcgagagcgcaaccaagacatcttcattccactgcca
gtgcaaaagggagtgccagtcatttcactcagccaccaacaggagattgccctggaggtc
acggtgaccaataagaacggagatgacgcatacgagtcagttctgaccgcatcgttcccc
gactccctctcttacgccgcagttcgccccaacaatgttatctcatgtcaggccaatctg
aacggatcaaaagctgagtgtgaactgggaaatcctttcaaacgagactcgaaaatagta
ttttacatcgttctgagcactggtgggatttcgttggacacgaccgaagtagaagttaag
ctagatctcaaaacgacaagtgaccaggcaccacagatagtgacaaagaaagctaacgtt
gtaattgagctgctgttgtcgctttctggtgtggcgaagccgtcccagctggagttctct
ggaacagtcataggagagagcgctgtgaagtcggaaactgacatcggaaaccagattgac
tatgaattcagggtgatcaacttgggaaagcctctgaagtcgttcggcacggcgtttctg
aacatcgactggcccaagaacacagctacaaagaaatggctgctgtacctgatgaagatc
actactacgggtacagataatgtccactgcagaccagatgaggtcaacaagctcaggcta
ccgagggatccatcactgtccaggtccaagcgtgaaactaaagatggaggtgaaagcaca
ggaggagataacggaggagttttatcagcccttttttctgacaagaggaaatctaaagtc
ttgacctgtgatgatggagcatcgtgtgtgaagctaaagtgtcctcttcagggattggac
agcaatgccgtcattgcactgagagcccatctgtggaatggcaccttcatagaggacttc
tcagacatgaattatgtcgacatagttgtgaatgcatcactcagtctggacaatgccccc
aaaaatgttttgctgacaaataaagatacactggtacgagtgactgtattcccagtacgt
aaggcagcacaatatggaggtttagcctggtgggtcatactggtggctatattactgggc
ctgctcctgctcggcttactggccttccttctctggaagtgtggatttttcaaacgttcc
aaatacaacgacagcgtgccaagttacaacgccgtgaggattaagaaggaagagcgccga
gatccaccggggaaagagcagccggcctcggtggaaaagaaacagtggatgacaacttgg
aacgagaatgagagctactcctag

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