KEGG   Ictalurus punctatus (channel catfish): 108260261
Entry
108260261         CDS       T04658                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
  KO
K15694  E3 ubiquitin-protein ligase RNF43 [EC:2.3.2.27]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    108260261
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108260261
Enzymes [BR:ipu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108260261
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108260261
SSDB
Motif
Pfam: ZNRF_3_ecto zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_5 zf-RING_UBOX pAdhesive_17 EphA2_TM zf-ANAPC11
Other DBs
NCBI-GeneID: 108260261
NCBI-ProteinID: XP_017315868
Ensembl: ENSIPUG00000012016
UniProt: A0A2D0QB05
Position
28:complement(13114786..13227995)
AA seq 800 aa
MRLAAQRLAGLWPWLITAALQVALGHAGLEVSATRALIKVTLLNPKAPGPITLEGVFAGS
SSGFAEGKLMQSHPLSLCNTSEDERQENAFISIVKLESPESKVPQCLPLLEKARLALNRG
AQAVIFDITDDVSAAIELNSGFLKKPVVMVKAADAEELMGLVNKNEEANVEINIMMETPK
WPHYEVGILLTVVLVVLAIIMIFAFRSRCRSNRTWDSVHQQTMRAISRLETRTYSSQGCS
GGSHHPHSGRGSNSSSSSGPMCAICLEDFLDGQDLRIISCAHEFHKECVDPWLLQHRTCP
LCMHNIMAGAEPSGRQPQRLRGHPPPEHSQAFLYPHSQHYPASHSFPQPPIPFSLRPHYP
HTLSGPYPQLGAYSGSPPYHTRLLSTSCSYHLAPDGHRARPRHNCRNVGHHYTSSRRPCH
HCHANRMRHQNHHQNQRHGGSQGRQDEGSCSGASYGTERSGYFPDGPGSDSSSGPCHGSS
SDSVLNCTDVSLQGVYGSCSTFRSSLSSEYDPFVYHNAGAEGPTGSTRPRSLDSGVNQTS
GGLGFEEPQQQQAVFSHVHYHRHRHHYYEEGEPNQGPGRGSDEEQGTSGVAAGNSSMSKD
STLCQGAHVACHCPKTDPIDRCGPPGGVEDRDAAPPSPTSSLPGTSVLIPAPACCHPGHP
HCQKPTSCSLEASAPPMPAVHFHQRVDLQDDCSIHIHYGQSPAGYCCPPPLGAASTLLPV
PVILDSGGLAEWPCCRGARRGWQKQVQQAHSEPQLMGTGTLLDAPLCRGHHSAGHELPTE
ICLYCQSVRNNQGSEEESGV
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgaggctcgccgcacagcgcctggccgggctctggccgtggctgatcacggctgccctg
caggtggcgctgggccatgcgggcctggaggtgtcagcgacccgcgccctcatcaaggtc
acgctgctcaaccccaaagccccagggcccatcaccctggaaggggtgtttgctggaagc
agcagcggattcgctgaggggaaactcatgcagtctcacccgctgtctctgtgtaacacc
agtgaggatgagcggcaagaaaatgccttcatcagcattgttaagctggagagtccagag
agcaaagtgccacagtgcctgccacttctggagaaggcccggctggctctaaacagagga
gctcaggctgtcatttttgacatcactgatgatgttagcgctgctattgagttgaattct
ggcttcctgaagaagccggtggtgatggtgaaggcagcggatgctgaggagctgatggga
ctggtcaataagaacgaggaggccaatgttgagatcaacatcatgatggagacaccaaaa
tggccccattatgaagtgggaatcctcttgacagtcgtgttggttgtgctggcaatcatt
atgatctttgcctttcgttctcgctgcaggtccaaccgaacttgggactcggtccaccag
cagaccatgcgggccattagcaggctggagacccgtacctacagctctcagggctgctca
ggaggatctcatcatccacatagtggccgagggtcaaacagcagctccagctctggccct
atgtgtgccatctgccttgaggactttctggatggacaggatctgaggatcatctcatgt
gcgcatgagttccataaggaatgtgtggacccttggctgcttcaacaccggacctgtcca
ctctgcatgcacaacataatggcaggtgcagagccgagtggtcgtcagcctcagcgactt
cgtggacatccacccccagagcacagccaggcttttctttacccccactcacagcattac
ccagcttctcactcttttccccagccccccattcccttctccctacgaccccattacccc
cataccctctcgggaccctatccccagctgggagcctatagtggctcccctccctaccac
actcgcttattgagcaccagctgcagctatcatcttgcccctgatgggcaccgtgcccga
cctcgccacaactgccggaacgtcgggcaccactacacatcttcgcggcgtccgtgccac
cactgccatgccaaccggatgcggcatcagaatcatcaccaaaaccagcgccacggaggc
tctcaggggcgccaggatgagggcagctgctcaggggccagctatggcacggaacgcagt
ggctacttccctgatggacctggcagtgactcaagctcgggcccatgccacggctcatcc
agtgactcagtgctcaactgcaccgatgtaagcctgcaaggtgtctacggcagctgctct
acctttcgtagttcgctcagcagtgagtatgacccatttgtctaccacaatgctggtgct
gaaggtccgacaggtagcaccaggccccgatctctagattcaggagttaatcagactagt
ggaggacttgggtttgaagaaccacagcagcaacaggctgtattcagccatgtgcactac
catagacacagacaccactattacgaagagggcgagcccaaccaaggaccaggaagaggc
tctgatgaggagcaagggacatcaggagtagcagcaggcaattcatccatgagtaaggac
tcaactttgtgtcagggggcacatgttgcctgccattgccccaaaacggaccctatagac
aggtgtggacctcctggtggagtggaggatcgggatgcagctcctccatcccccacttcc
tccttgcctggcacctcagtgctgatacctgcaccagcctgctgccacccagggcaccca
cactgccaaaaacccaccagctgcagtctggaagcttctgccccacccatgccagctgtg
cacttccatcagagagtggatctacaggacgattgcagcatccacatccactatgggcaa
agtcccgcaggttactgctgcccccctcctctgggtgcagcctccacactgctgcctgta
cctgtaatcctggactcaggtgggctggcagagtggccctgctgcaggggggcacgaagg
gggtggcaaaagcaggtgcaacaggctcactctgagccacagctaatggggacaggcact
ctattggacgcacctctgtgcagagggcatcacagtgccgggcatgaactgcccacagaa
atctgtctctactgccaaagtgtacgcaataatcagggatcagaggaagagtctggtgtt
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (114)   
   KEGG ORTHOLOGY (1)   
   RefGene (109)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (140)   

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