KEGG   Ictalurus punctatus (channel catfish): 108261004
Entry
108261004         CDS       T04658                                 
Name
(RefSeq) transcription initiation factor IIE subunit beta
  KO
K03137  transcription initiation factor TFIIE subunit beta
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108261004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ipu03021]
    108261004
Transcription machinery [BR:ipu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     108261004
SSDB
Motif
Pfam: TFIIE_beta TFA2_Winged_2
Other DBs
NCBI-GeneID: 108261004
NCBI-ProteinID: XP_017317298
Ensembl: ENSIPUG00000003793
UniProt: A0A2D0QF53
Position
29:complement(3895713..3914951)
AA seq 289 aa
MDPALLRERELFKKRALSTPAVEKRPASSEASGSSKKKKSKPDKDSSSKNNADSSNGSFN
LKALSGSSGYKFGVLARIVNYMKTRHQRGDTHPLTLEEILDETKLLDIGLKQKQWLMTEA
LASNPKIDVREGKYAFKPKYHLKDKKALLRLLDKHDQQGLGGVLLDDVEEGLPNAAKAIK
ALGDQIIFVARPDKKKILFYNDKHCHFEVDEEFQKLWRSVPVDSIDDEKIEEYLKRQGIS
SMQDTGPKKMTPVQKRKKSGTQKKRRFKTHNDHLNGVLEDYTDGVPSKK
NT seq 870 nt   +upstreamnt  +downstreamnt
atggaccctgcactgctgagagagcgtgagctctttaagaagagggctttgtccactcca
gcagtcgagaagagaccggcgtcctctgaagcctctggctcttccaagaaaaagaagagc
aaacctgacaaagactcgtcatctaaaaacaatgcagactccagtaatggatccttcaat
ctcaaagctctctctggaagctcgggctacaaattcggggtcctggcacgaatcgtcaac
tacatgaagacaaggcatcagagaggagacactcatcccctaaccctggaagagatttta
gatgagaccaagctgttggacatcggcttgaagcagaagcaatggcttatgactgaggcc
ttggcaagtaaccccaagatagacgtgcgtgaagggaaatacgcctttaaacctaaatac
catctgaaggacaagaaggcgctgctcaggttgctggacaagcacgatcagcaggggtta
ggaggagtgctgctggacgatgtggaggagggcctgcccaacgctgccaaggccatcaaa
gctcttggagaccagatcatattcgtggccagacccgacaagaaaaagattctcttctac
aatgacaaacactgtcacttcgaagtagacgaagagtttcagaagctgtggcgcagcgtt
ccagtggattccatcgacgacgaaaagattgaagagtacctgaagagacagggaatctcc
tccatgcaggatactggaccaaagaaaatgacgccggtccaaaagaggaagaagtcggga
acgcagaagaagagacggttcaagactcacaacgatcatctgaacggtgtgttggaggac
tacaccgatggagtccccagtaagaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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