KEGG   Ictalurus punctatus (channel catfish): 108263163
Entry
108263163         CDS       T04658                                 
Name
(RefSeq) integrin alpha-9 isoform X1
  KO
K06585  integrin alpha 9
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04510  Focal adhesion
ipu04512  ECM-receptor interaction
ipu04514  Cell adhesion molecules
ipu04810  Regulation of actin cytoskeleton
ipu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108263163
   04514 Cell adhesion molecules
    108263163
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108263163
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108263163
   04810 Regulation of actin cytoskeleton
    108263163
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ipu04515]
    108263163
Cell adhesion molecules [BR:ipu04515]
 Integrins
  Integrin alpha subunits
   108263163
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 Integrin_alpha FG-GAP_2
Other DBs
NCBI-GeneID: 108263163
NCBI-ProteinID: XP_017319172
Ensembl: ENSIPUG00000018145
UniProt: A0A2D0QLA1
Position
3:complement(8388618..8470137)
AA seq 1032 aa
MYCTRTGLLTWKSRMLDVLCVCLSLSLVCAYNIDLDHPLVFRGQNATFFGYSVLEHFHNN
TRWILVGAPRANSSFSNSVSSPGAVFKCRIHSNPEHRCTEIDLGRGNKKRESCGKTCQGD
RDDEWMGVSLARQDKPNGRVLACAHRWKNVYYESEHILPHGYCSLIQPTLQGRAQALIPC
YEDHKKMYGEEHGSCQAGIAGAFTEELVVMGAPGSYYWTGTVKVFNITSSTQYSLNKNQL
NSQRYSYLGYAVTAGHFSSPTAIDIAAGAPQDGGGGKVYVFRIDGVSLVKVFQESGKLMG
SYFGSSLCAVDLNADGLSDLLVGAPMFSEVRDEGQVSVFISRGNGVMEEAMVLNGDNAYN
AHFGECISAIGDIDDDGYQDVAIGAPKEDDFGGAVYIYHGDAKGIVNKYSMRLSGRSFNP
AIQMFGQSISGNVDMDGNGYPDVTIGAFMADSVVLLRSKSVITVDVSIYLPASINITVPQ
CHEGPQHLNCFNVSVCMRFRGKHVPGRIELLYNLTADADKRYKGLSSRVYFTHGGEQSGT
VSQNFSLSINQQECHHYTAYVRKEVKDVFAAITFEASYSLGKHVLDVDRGRELASLSPVL
RWRKGDKIAQRNETWFEKNCLSDDCAADLKLHGKLLLSGHHIRPHLALGGVKNVSLNITI
VNAGDDAYDTNIYLNFSREVHYINFLQREEKGISCELIQLDFLKCSVGFPFMRAQTKYHL
SVLFDTSHLSGENETLLFLVHAKSANPEHENKLHDNTLELSILLMHEVDTAVTGVVTPSS
FVYGNSVDSSHFVKLEDLECNFQPLNFTFQVINNGPSRLPGSTVDIRIPNTLVANGADMF
HIIDTHVGEGRGNCTWHRNPTPCIIIQERENIFHTIFAFFTKSGRKVLDCDRPGRACLTI
SCSLGSQAKDEAALIDVQMLLNTETLKKDSSSVIQFVTRSHVQVDSRAMEVSSGLPEDIS
LVFEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRHYREIIEAEKNRKD
SDESWDWVQKSE
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgtactgcacgaggaccggactgttaacgtggaagagcagaatgttggatgttttgtgc
gtgtgtttgtccttgtctttggtttgtgcttacaacattgacctggatcaccccctggtt
ttccgtgggcagaacgcgacgttttttggctactcggttctggagcacttccacaataac
acacgatggattctggttggggctcctcgagcaaattcatccttcagtaactctgtttcc
tctcctggagctgtgtttaagtgccgtatacacagcaacccagagcatcgctgtacagag
atcgacttgggcagaggtaacaagaaaagggagtcttgtggaaagacatgccaaggggac
agggatgatgagtggatgggggtcagtctggcaagacaagacaaacccaatggaagagtt
ctggcctgtgcacatcgctggaaaaatgtgtactatgaatcagagcacatcctaccacat
ggctactgctctctaatccaaccaacattacaaggcagggcccaggcactcattccatgt
tatgaagatcataagaagatgtatggggaagaacatggctcatgccaggcagggatcgca
ggagctttcacggaggagctggtggtcatgggagcaccgggatcatactactggactgga
acagtgaaagtgttcaatatcacctccagtacacaatacagcctcaacaaaaatcagctg
aattctcaaagatacagttacctgggctatgcagtgacagctggtcacttctcctcacct
actgccatcgatatcgctgccggtgcacctcaggatggtggtggaggaaaagtttacgtc
ttcagaattgacggtgtctcgcttgtgaaggtctttcaagaatcagggaaactgatgggc
tcttactttggctcctcactgtgtgcagttgacctgaacgcagatggactctcagacctg
ctggtcggagcaccaatgttcagtgaagttcgggatgaaggccaggtgtctgttttcatc
agcaggggcaatggggtgatggaggaggcgatggttttgaatggggacaacgcatacaat
gctcatttcggagagtgtatcagtgccattggggacatcgatgatgacgggtaccaagat
gtggcgataggagcacccaaagaggatgactttgggggtgcagtgtacatctaccatggt
gatgctaaaggaatagtcaacaagtactcaatgaggttgtctgggcgaagttttaatcca
gccatccaaatgtttggccagtcaatatctggcaatgtggacatggacggaaacggatat
ccagatgtgacaatcggtgcattcatggcagacagtgtggtgttattaaggtcgaaatca
gtaatcacagtggacgtgtccatctatttgccagcctccataaacattactgtgcctcag
tgtcatgaaggtccacagcatctcaactgctttaacgtcagcgtctgtatgcgcttccgt
gggaaacatgtgccaggacggatagagctgctgtacaatctaacagcggatgcagataag
cgatataaaggcctgtcttcacgggtctatttcactcatggtggcgagcagagtggtact
gtgagtcaaaacttcagccttagcatcaaccagcaggagtgccatcactacacggcctat
gtacggaaagaagtgaaggatgtgtttgcagccatcacatttgaggcatcgtacagcctg
ggcaagcatgtactggatgtagaccgtgggcgtgagcttgcttcactctctcctgtacta
cgctggaggaaaggagacaagattgcacaaaggaatgagacttggtttgagaagaactgt
ttgtctgatgactgtgctgctgacctgaagctacatggcaaactgttgctttcaggacat
cacatcaggcctcatcttgctctcggaggggtgaaaaatgtctctctcaatataaccatt
gtcaatgctggagatgacgcttacgacaccaacatctacctaaatttttccagggaggtt
cactacataaactttctgcagagggaagagaagggcatttcctgtgaactgattcagctg
gacttcctcaaatgcagtgtgggatttcctttcatgagagcccagactaagtaccatctg
tctgtgctttttgacacaagtcatctgtctggtgaaaatgaaacattgctatttttagta
catgccaagagcgccaacccagaacatgagaacaaattacacgataacacgttggagctg
tccatcctgctgatgcacgaagtggatacagctgtcactggtgtggttactccttcctca
ttcgtgtatggaaattctgttgactcttctcactttgttaaactggaggacttggagtgc
aacttccagcctctcaactttaccttccaggtgataaataatgggccaagcagactgcca
ggctcaactgtggacataaggatacctaacacactggtggcaaatggagccgacatgttc
cacatcatagacacacatgtaggtgagggcagagggaactgtacatggcacagaaaccct
acaccatgcatcatcatccaggagagagagaatattttccataccatctttgcattcttc
accaagtctggcaggaaggtcttggactgtgaccggccaggaagagcctgtctaaccatt
tcctgtagcttaggatcccaagctaaagacgaagctgcacttattgatgtgcaaatgcta
ctgaacactgaaacacttaagaaagacagctcctcggttattcagtttgtgacacgaagt
catgtccaagtggacagccgggctatggaggtgtccagcggcctaccagaggacatttct
ctggtgtttgaggctctgcacagtcaggagcccaggggttatgtggtgggatggatcatt
gccatcagtctgctagtggggatcctcatcttcctcctgctggctgtgcttctctggaag
atgggatttttcaggcggcattaccgagagataatagaggcagaaaagaacaggaaagac
agcgatgagagctgggattgggttcagaagagtgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (42)   

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