KEGG   Ictalurus punctatus (channel catfish): 108263681
Entry
108263681         CDS       T04658                                 
Name
(RefSeq) proto-oncogene c-Rel isoform X1
  KO
K09254  c-Rel proto-oncogene protein
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108263681
Transcription factors [BR:ipu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    108263681
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer
Other DBs
NCBI-GeneID: 108263681
NCBI-ProteinID: XP_017320215
Ensembl: ENSIPUG00000021629
UniProt: A0A2D0QRV5
Position
3:22300648..22309636
AA seq 605 aa
MDAHFPVLNMGEPCVQIFEQPKQRGMRFRYKCEGRSAGSIPGERSSDNNRTYPSIQILNT
CGRGKVRVSLVTKNEPYRPHPHDLVGKDCKDGYYEAEFGPERRVIAFQNLGIQCVRRREV
RDAILQRVNRGLNPFNVPREQLLQTEEYDLNVVRLCFQVLLQDETGCYSIALPPVISNPI
YDNRAPNTAELRICRVNKNSGSVKGGDEIFLLCDKVQKDDIEVRFFTQTWEARGSFSQAD
VHRQVAIVFRTPAYCDTSITSPVTVHMQLRRPTDQEVSEPMEFRYLPDDKDPYGCREKKR
KLDDLMKSFPSFTSGPVGPMDRKQGYQPQGLNSRIKYEKTSYVNPLHGTRRPSQQHMYNS
YQPRIMPSTSACPAPVSFNQDQWATSSLHFSPASSNPGASNGGGMSQVNQVNTVPSLNTT
GESGNSLPLLSPRDLEFLDPQGASANQPRQEQLEHSVQHSQQPLHRKETMPAGESLWPNF
DPSSGTQNGPASTGMNYTYPDCQDGSEILHSLVGPQTGLNLKQEPQGQSTLAMLDPNTNL
FESYTMLNYPPTSSSNQEAMRHAASSGASGSGQRNTQTPSYSIRNMAQEANLDTLNWPYN
QFGGE
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggatgctcatttccctgtactgaacatgggagagccctgtgttcagatctttgaacaa
cccaagcaaagaggcatgcgctttaggtataagtgcgaaggccgttcagcagggagtata
cctggagaaagaagttctgacaataataggacttatccaagcatccagattctgaacacc
tgtggaagaggaaaagtgcgcgtgtcattggtaaccaaaaatgagccgtacagaccacac
ccacatgacctggtggggaaagactgcaaggatggatattacgaggcagaatttggacct
gaacgcagagttattgccttccagaacctgggtatccaatgtgtaaggagaagagaagtc
agggatgccatattgcagagagtgaaccgaggcctcaaccccttcaatgttcctcgggag
cagctcttgcagacggaggaatacgacctgaacgtggtgcgtctgtgtttccaggtcctt
ttgcaagatgagactggatgctacagcattgcactgccacctgtcatctccaatcctatc
tatgacaaccgtgcaccaaacacagctgagctgcgcatctgccgcgtcaacaaaaacagt
ggcagcgtgaagggtggtgatgagatcttcctgctctgtgacaaagtccagaaagatgat
atagaagtgcgcttcttcacccagacctgggaggccagaggctccttctcccaggcagat
gtgcacaggcaggtggctatcgttttccgtacgcctgcctactgcgacacctccatcacg
tctcccgtcactgtgcacatgcagctgcgccgccccactgaccaggaagtgagtgaaccc
atggaatttagatacctgcccgatgacaaagatccatatggctgtcgagaaaagaagcga
aaacttgatgatctaatgaagtcgttccctagtttcacatctggacctgtgggacctatg
gacagaaaacaaggatatcaacctcaaggattaaactcaaggattaaatatgagaaaact
tcctatgtaaatcctcttcatggtacaaggaggccaagtcaacaacacatgtataattcc
tatcagccccgtataatgccatccacttcagcatgtccagcaccagtatcattcaatcaa
gatcaatgggctacttcttcacttcacttcagcccagctagcagcaaccctggggctagt
aatggagggggtatgtcacaggttaaccaagttaacacagttccctccctaaacaccaca
ggggagagtggaaacagcctccccttactgagtccaagggatctggagtttcttgatcct
caaggtgcttctgccaaccagcctcggcaggagcagctggagcacagtgtccagcattca
caacagcctctccacaggaaggaaaccatgcctgctggtgaaagcctctggcctaacttt
gatccctcatcaggaacacaaaatgggcctgcaagcacagggatgaattacacatatcca
gattgtcaggatggaagtgaaattcttcatagcttagtaggccctcagacaggtcttaat
ttaaaacaagagcctcaagggcaaagtaccttggcaatgctggaccctaacaccaacctc
tttgagtcctacaccatgctcaactatccaccgaccagcagcagcaatcaggaggccatg
agacatgcagccagtagtggagccagtgggtcaggacagaggaacacacagaccccatcc
tactccatcaggaacatggcccaagaagctaatctcgataccctcaactggccctacaat
caatttggtggcgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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