KEGG   Ictalurus punctatus (channel catfish): 108266741
Entry
108266741         CDS       T04658                                 
Symbol
als2a
Name
(RefSeq) alsin isoform X1
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108266741 (als2a)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    108266741 (als2a)
SSDB
Motif
Pfam: RCC1 RCC1_2 MORN VPS9 PH
Other DBs
NCBI-GeneID: 108266741
NCBI-ProteinID: XP_017325902
Ensembl: ENSIPUG00000012149
UniProt: A0A2D0R5L6
Position
6:27105721..27126975
AA seq 1686 aa
MFMKRWRPEVCEEDASGVKTLMEGQKSSSEEEEGSHNRGVPHKWQGYSCTVKPARVFLPQ
PVLQAALGISHGVLLTNDGLVYSFGELPWKRDLKSQTVEPVLESSLTGHRVVRVSAGSFH
CGAVTEEGMVHMWGENSHGQCGIFGFSVVHNPTPVNIVDDEIVPPELVQIQDVACGAQHT
LVLSRKHEVWAWGSGCQLGLVTTVFPVWKAQKVEHLSGRHVLQIACGEFHSLALVRLLPL
PVSSQQSQDKCGQCKQPIYTLIDKDDHVIISDNHYCPLGVELFDAKQCQKSKQASPSLTS
EMETSAHDPQSSVVSPGDFCPSQSALDESHNDDTAGEKEEDHNDPAPETMTDRSESPQQC
RARTKSSLYPDEQALKDYLKRLSGQSQSEQFEAVSRKGSCPPSRQTSLKDSYRLDQNNKP
TFPSLAPLTTSDDFKSTLSDDIALMTLHDSVTDSVCDDSSEDTVIPSDPLTYNNCEEVTD
DSFSTDSNHCPYKSLEAKKSASLTDIRFNDTDGYSRRRSLPGLLSPVSPVSLRCNLAKAG
AVNSKSKHISEKEIFLPSLHTEVWTWGRGQEGQLGHGDTLPRLQPLCIKSLNNKEVIKIV
AGSCHSLALTAQCQVYSWGCNKLGQLGHMNSPSTVPQHVKMSDGIRVWDVAAGQTHTVLL
ADGDCLQPILYYSGEQVQAREDSPTATYTQTPTLLPFFMNLGYVSSIFAGGPNCVALADR
NVMGFIATLHELASAERKFYCMLSRVKNQILHPLLARDSVSSCLGRTSMQLFKTMAGKYS
HLCRLIGQHATSLTNFLQHGRNVKTLAILKNTDLFLDTYKKYSNPVGNFLVMGGFQSLVK
PSQECLGKRLDLIVTLLDLKEKNVSLSDLLVNLFYMPLQHLHDYSSLLLKLATCFDVSSV
EYQMIQDSCLQYEVLAQLLSKQRKQADSTYTFWKNFSGKSSESLRKPSRRLVCESSNKGL
TLQNAGRFSVNWFILFNDALVHAQGTIPSKKFFSSYYVYLLATLWVEPISDKNVGLLGLK
LITPEENFTLLASSPLEKGKWLRAINQAVEDVLGVDQRTEPPVSRTATYTFTKDGRLKDA
TYTGRWLSGKPHGSGTMKWPDGRVYCGTFKNGLEDGFGDCMMPRQTINKYDRYKGHWKEG
KMHGFGTYWYATGEVYEGLFQENLRHGHGMLSSGRLASFSSSVFVGQWVQDKKTGYGIFD
NITKGEKYMGMWLEDQRQGTGVVITQFGLYYEGEFSNNKMMGNGLLLCDDDTFFEGEFSE
DWTLNGKGVLSIPNGDSFDGIFVGEWGSELKVAGVFTKMWLYETEPMENKTFEVGRYAVP
AEQKWVAVFAECWNRLGCETPGVGEKERAWENIAVMLTTSCRQQRDGPRALSRSQCKMLE
SLEVIPQHVSPVTAEAYDIIRRYLIKAFDTPLHLLGWLLETLVTVYRMTYVGVGSNKRLL
KQAVEEIQSYLKRIFQLVRFLFPGLPDEGGFIPDSEKRASDVQSSNTHSDTTQQGWIVSS
TTLLLPVLLPRLYPPLFTLYTQAREREEEVYWECVLRLNKQPDLSLLTFLGVPQKFWPVS
ISVLGEIKDVLPSSMNVCFATAVETLQQISTTFTPADKLQVIQLTFEDITQEVQAMLGQG
FLWCMDDLFPVFLYIVLRARIRNLGSEVSLIEDLMDAALQHGELGLMFTTLKACYYQIQR
EKPTGM
NT seq 5061 nt   +upstreamnt  +downstreamnt
atgttcatgaagagatggaggccagaagtgtgtgaggaagatgccagtggagtgaaaaca
ctgatggagggccagaagagtagttctgaagaagaggaaggctcacataacaggggtgtg
ccccacaagtggcagggctactcatgcactgttaaaccagcgagggttttccttccacag
cctgttcttcaggctgcactggggatcagccatggagttctattgacaaacgatggcctt
gtctacagctttggagagcttccatggaagcgagacttgaagtcccagacagtagaacct
gtgctggaaagctctttaactggccaccgtgtggtccgtgtatctgcgggtagttttcac
tgcggtgccgtaacagaggaagggatggtgcacatgtggggcgagaactcccatggtcag
tgtggtatctttggttttagtgttgtccataatcctacccctgtcaacattgtggatgat
gaaattgtccctcctgaactggtccagatccaggatgtggcctgtggggcacagcacaca
ttagttttgtcaaggaagcatgaggtgtgggcctggggtagtggctgccagttgggcctg
gtgactactgtgttccctgtgtggaaggcacagaaagtagagcatctatcagggagacat
gtgctccagattgcctgtggtgaattccacagcttggctttggttcgcttactacccctt
ccagtgtcctctcagcaatcccaggacaaatgtggccagtgcaagcagcctatttacact
ttgattgacaaggatgaccatgttattatttctgacaaccattactgcccactaggggtg
gaactattcgatgcaaagcagtgtcaaaaatcaaagcaggcatctccatctttgacgtca
gagatggagacctcagcacatgacccccagagttctgttgtgtcacctggagatttctgc
cccagtcagagtgcgctggatgaatctcacaatgatgatacagcaggtgagaaggaagaa
gatcacaatgatccagcccctgagactatgactgaccgctcagaaagtccacagcaatgc
cgtgcaagaaccaaaagctctctttaccctgatgaacaggctctgaaagactacctcaag
aggctctctgggcagtctcagtcagagcagtttgaggcagtctccaggaagggttcatgt
cctccaagccgtcagacatcactcaaagactcttatagactggaccaaaacaacaaacct
acatttccttcattggcaccacttaccacgagcgacgattttaaatccacactttcagat
gatattgcactgatgacgttacacgactccgtcacagattctgtctgtgacgactcatct
gaagacacggtcattcctagtgaccctttaacatataataactgtgaggaggtcactgat
gacagcttctcgacagatagtaaccactgtccatataagtcactggaagccaagaaaagt
gccagcctgacagacattaggtttaatgatacagatggatatagtcgtagaagatcatta
cctggcttactgtctccagtttctccagtatcgcttcggtgcaatcttgccaaagccgga
gcagtcaactcaaaaagcaaacacatctcagagaaggaaattttccttccgtctctccat
acagaggtgtggacttggggcagaggtcaagaaggtcaactaggtcatggagacaccttg
cccaggttacagcctctatgtattaagagcttaaacaacaaggaagttatcaagattgtt
gctggatcatgtcattctttggccttgacagctcagtgtcaggtttattcttggggttgc
aataaattaggtcagttgggtcacatgaactctcctagcactgtgccacagcacgtgaag
atgtctgatggtatccgtgtgtgggatgtagcggcagggcagacacacaccgtgctgctt
gctgatggagactgcttacagcccatattgtattacagtggtgagcaggtgcaggcacgg
gaggactctcctactgcaacgtatacacagacaccaactctactgcccttcttcatgaat
cttggctatgtgagtagcatttttgctggaggaccaaactgtgtggctctggctgatcgg
aatgtcatgggtttcatcgccactctgcatgagttggcatcagcagagagaaagttctac
tgcatgctcagcagggtgaagaaccagatactgcatcccctactggcccgggacagtgtg
agctcgtgtttggggcggacctccatgcagctgttcaagactatggcaggaaaatacagt
catttgtgccgtctaataggacagcacgccacctctctcactaacttcctacagcatggg
agaaatgtaaaaactctggccattttgaaaaatacagaccttttcctagacacctataaa
aagtatagcaatcccgtaggaaacttccttgtcatgggaggattccaatcactggtgaag
ccctcgcaagaatgtttggggaaaaggctggatctgatagtaactctgttagacctcaaa
gagaagaacgtctcgctaagtgatttgctagtaaacctgttttacatgccgctgcagcac
ttgcatgactacagcagtcttctcctgaagctggctacttgctttgatgtgagctctgtt
gaatatcaaatgattcaagatagctgcttgcaatatgaggtcttggctcaacttctaagc
aaacagaggaaacaggcggacagtacttacactttctggaagaacttttcaggaaagagc
tcagagtctttgcggaagccgtctcggcggctggtgtgtgagagtagcaataaaggcttg
accctgcagaacgctgggagattctcagtcaactggttcattctcttcaatgatgccctt
gttcatgcacagggtaccattccatctaagaagtttttttcctcttactatgtctatctg
ctggccacactgtgggtggagcccatctcagacaagaatgtgggattgttgggactgaag
ctgattacccctgaagaaaacttcactttgttggcatcatcacctctggagaaggggaag
tggctgagggccattaaccaggctgtggaagatgtgctcggagtggatcagaggacagag
cctcctgtttcccgcactgccacttatacttttactaaagatggcaggctcaaagatgcc
acatacactggccgctggctctcaggcaagcctcatggcagtggcaccatgaagtggcct
gatggcagagtttactgtgggacatttaaaaatggcctggaagacgggtttggagactgt
atgatgcccagacaaaccatcaacaagtatgaccgttacaagggccactggaaggagggc
aaaatgcatggatttgggacatattggtatgctacaggtgaggtgtatgagggcttattt
caggagaacctgcgtcatggccatggcatgctgagtagtggcagactagcctctttctcc
agcagtgtgtttgttggccagtgggtccaagacaagaaaactggctatggaatatttgac
aacatcacaaaaggagaaaaatacatggggatgtggctggaggaccagaggcagggcacc
ggggttgtgatcacccagtttggtctatattacgaaggagaatttagtaataacaaaatg
atggggaatgggcttctgctctgtgacgatgacactttctttgagggagagttttcagaa
gactggacattgaatgggaagggcgtcttgtccatacctaacggagattcttttgatggt
atctttgtgggcgagtggggctctgaactgaaagtggctggcgttttcacaaaaatgtgg
ctgtatgagactgagccgatggagaataagacctttgaggtcggtcgttatgcagtacct
gctgagcagaaatgggtggctgtgtttgcggagtgctggaaccggctgggttgtgaaacc
cctggagtgggagagaaagagagagcctgggagaacatcgcagtcatgctgacaaccagc
tgcagacagcagagagatggaccaagggctctgagtcgctcccagtgtaagatgttggag
agtctggaggttatccctcagcatgtcagtcctgttactgctgaagcctatgacatcatc
cgccgctacctcatcaaggcatttgatactcctctgcatcttctgggctggctgctggag
acactggtcacggtgtacaggatgacgtatgtaggcgtgggctctaataaaaggctttta
aagcaggctgtggaggagatccagtcctacctcaaacgcatattccagctggtcaggttt
ctgtttcctggtcttccagatgagggtggttttatccctgactcggagaagagggccagt
gacgttcagagcagcaatacacattcagacaccactcagcagggctggattgtgagtagc
accactctgctgcttcctgttttgttacctcgtctctaccctccactcttcacactgtac
acacaggcgagagagagggaggaggaagtgtactgggagtgtgtgttacgcctcaacaaa
cagcctgacttgtctttgctcaccttcctgggagtgcctcaaaaattctggccagtctca
atttctgttttaggagagataaaagatgtgctgcctagcagtatgaatgtctgctttgct
actgctgtggagactctgcaacagatcagcacaactttcactcctgcagataagcttcag
gtcatccagctgacctttgaggacatcacgcaggaagtgcaagccatgttgggccagggc
ttcctgtggtgcatggatgaccttttcccagtcttcctctacatagttctccgtgcgcgg
atcagaaaccttggctctgaagtgagcctcatagaggacttgatggatgctgctctacag
catggagaactcgggctcatgttcaccactctcaaagcttgctactaccagattcagaga
gagaagcctactggcatgtag

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