KEGG   Ictalurus punctatus (channel catfish): 108270922
Entry
108270922         CDS       T04658                                 
Name
(RefSeq) serum response factor isoform X1
  KO
K04378  serum response factor
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108270922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108270922
Transcription factors [BR:ipu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    108270922
SSDB
Motif
Pfam: SRF-TF ThrE_2
Other DBs
NCBI-GeneID: 108270922
NCBI-ProteinID: XP_017333430
UniProt: A0A2D0RTZ0
Position
10:complement(19254073..19260597)
AA seq 367 aa
MELLPPGNQLSVSGSDADSDTAEEEEPGCVERGARQRRRTERETGASAPAIARTMVGGVA
GAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETG
HVYTFATRKLQPMITSETGKALIQTCLNSPDSPRSDSAADQRMSATGFEETDITYQVTES
DGSTEEKEVMKSAGSGVMNSTAQILTSSSVQSESSSTPFPAATCWSVSNGTLVKTSTSAA
GVLQLPAGFTLVPGAAVSQQLQSTESSEVQNFCSTVGSHSAVMATSISGHVICPSAVMYA
NSASTLTDHTLAPDALPPMFLTSPNGTVQIPLSAVPLHSMLINQQNSSSTRTLTELRGVN
MDSSKTE
NT seq 1104 nt   +upstreamnt  +downstreamnt
atggagctcttgccgcccgggaatcagctcagtgtgagcggctccgatgcagactcggac
acggcggaggaggaggagccgggctgcgtggagagaggcgcccggcagcggcggagaaca
gagcgggaaaccggcgcctcagccccggccatagctcgcaccatggtcggaggagtagcg
ggggctaaaccgggcaaaaagacccgcggtagagtcaaaattaaaatggagttcattgac
aacaaactgagacgttataccactttcagtaaaagaaagaccggcatcatgaagaaggca
tatgagctgtccaccctcaccgggactcaggtgttgttgttggtggcgagtgagacgggt
cacgtatacacatttgcaacacggaagctgcagccgatgatcacgagtgagacgggtaag
gcgctgatccagacatgtttgaactctcctgactcgccacgctccgactcagccgctgat
cagcggatgagcgctacgggcttcgaagagaccgacatcacctatcaggtcacggagagc
gacggcagcacagaggagaaggaagtgatgaagtctgcaggatctggtgtaatgaacagc
actgcgcagattctgacctcgtcctctgttcagtcagagagcagcagcaccccgttccct
gctgccacctgctggtcggtgtctaacggtacactggtgaagacttctacctctgcagct
ggagtgctgcagctccctgctggattcacactcgtgcctggcgcagcagtgtctcagcag
cttcagtcaacagagagcagtgaagtacagaatttctgcagcacagttggaagtcactct
gcagtgatggcgacctcgatatcgggacatgtgatctgcccaagcgcagtgatgtatgct
aactcagcctctacattaacggatcacacactcgcacctgatgcacttcctccgatgttc
ctcacatctcctaatggaacagttcagattcctctctctgctgtgccactccattcgatg
ttgataaatcagcagaactccagcagcacacgcactctgacagagttacgtggagtcaac
atggacagttctaaaacagagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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