KEGG   Ictalurus punctatus (channel catfish): 108272157
Entry
108272157         CDS       T04658                                 
Symbol
pbx1b
Name
(RefSeq) pre-B-cell leukemia transcription factor 1 isoform X1
  KO
K09355  pre-B-cell leukemia transcription factor 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    108272157 (pbx1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108272157 (pbx1b)
Transcription factors [BR:ipu03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain TALE
    108272157 (pbx1b)
SSDB
Motif
Pfam: PBC Homeobox_KN Homeodomain UCH YdaS_toxin GAIN LZ3wCH
Other DBs
NCBI-GeneID: 108272157
NCBI-ProteinID: XP_017335880
Ensembl: ENSIPUG00000011492
UniProt: A0A2D0S0Z4
Position
11:16799359..16884604
AA seq 429 aa
MDEQPRMMHSHAGVGMAGHPGLPQHMQEGTGGADGDGRKQDIGDILQQIMTITDQSLDEA
QARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDAQLMRLDNMLLAEGVSGPE
KGGGSAAAAAAAAASGGAGADNSAEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMN
LLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFN
KQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEE
ANMYAARTAVNAASVSAHGSQANSPSTPNSAGSAGSFNMSNSGDLFMSVQSMNGDSYQGA
QVGANVQSQVDTLRHVISQTGGYSDGLTANQMYSPQGINANGGWQDATTPSSVTSPTEGP
GSVHSDTSN
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggacgagcagccgcggatgatgcactctcacgccggggtggggatggcagggcacccc
ggcctgcctcagcacatgcaggagggaaccggaggagccgacggcgacggcagaaagcag
gacatcggagacattttacaacaaatcatgaccattacagaccaaagtctggacgaagcg
caggccaggaagcacgcgctgaactgtcacaggatgaagcccgcgctctttaacgttctg
tgtgaaataaaagagaaaacagtgctgagtatccgtggtgcccaggaagaggagcctccc
gatgcccagctcatgagactggacaacatgctgttggcagaaggcgtgtcggggccggag
aaagggggcgggtcagctgcggccgcagccgctgcggcagcgtcgggaggagccggagcc
gataactcagctgaacactctgattatagagccaagctctcacagatccgccagatttac
cacactgaactggagaaatatgaacaggcatgtaacgagtttaccactcacgtgatgaac
ctgttgcgagagcagtcgcgcacacggcccatctcgcccaaagagatcgaacgcatggtc
agcatcatccaccgcaagttcagctccatccagatgcagctcaagcagagcacctgcgag
gcagtcatgatcctccgctcccgcttcctcgatgccaggaggaaaagacgaaacttcaac
aaacaggccaccgagatcctgaacgaatacttctactcccacctcagtaatccgtatccc
agtgaggaggccaaggaggaattggccaagaaatgctctatcactgtctcccaggtgtcc
aactggttcggaaacaaacgaatccggtataagaaaaacattggaaagttccaggaggaa
gccaatatgtacgcagccagaactgcggtgaatgcggccagcgtgtcagctcacggcagc
caggcaaattccccctccacccccaactcagcaggttctgctggctcttttaacatgtcc
aactctggtgatttgtttatgagtgtgcagtctatgaatggcgattcataccagggggct
caagtgggagccaacgtgcagtcgcaggtggatacccttcgccatgttatcagtcagaca
ggaggatacagtgatggcctcacagccaaccagatgtacagtccgcagggcatcaatgct
aatggtggatggcaggatgctactaccccctcctcagtgacctcacccacagaaggaccc
gggagtgttcactccgacacctccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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