KEGG   Ictalurus punctatus (channel catfish): 108272271
Entry
108272271         CDS       T04658                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ipu01002]
    108272271
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108272271
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108272271
Enzymes [BR:ipu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     108272271
Peptidases and inhibitors [BR:ipu01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   108272271
Ubiquitin system [BR:ipu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    108272271
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108272271
SSDB
Motif
Pfam: UCH zf-UBP_var UBA zf-UBP UCH_1
Other DBs
NCBI-GeneID: 108272271
NCBI-ProteinID: XP_017336073
Ensembl: ENSIPUG00000008925
UniProt: A0A2D0RZZ3
Position
11:17943374..17971932
AA seq 859 aa
MATDLGELLVPYMPTIRVPRSGDRVYKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAVPRRRNGKVFLDLELNRDFNGDDFEYEDEAKL
VIFPDHYEIPLPNIEELPALVTIACDAILNAASAYKKQEQDSWEEELQVSKHARSLRQQE
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYKETKFPLAVK
LDTITPDGADVYSFDEEEAVLDPHIAEHLTHFGIDMLKMQRTENGHHTDNHVQPRATEWE
VIQESGLKLKAVYGSGYTGLRNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFSTQMAKLGHGLLSGQYSKPPIKSELIEQVMKEEYKQQHRGISPRMFKALVSKGHP
EFSSNRQQDAQEFFLHFINLVERNSSGSENPSDVFRFIVEERVQCCQSQKVRYTQRVDYL
MQLPVPIEAATNREELIAYETKRKDAEKNLRAPPDPVRARIPFTACLQAFNEPENVLDFW
SSALQAKSAGVKTSRFTTFPEYMVVQLKKFTFGVDWVPKKLDVSVDMPDFMDLNRFRATG
LQAGEEELPDLTPPIVIPEDIRDSSVNNSLESPEIDEASVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLAIPSYMEADLPSASFPTVSPLDNQPPEESISILTS
MGFPRHHTIRALKATNNNLERALDWIFTHPESEEESEAMSDMVDTEPNDTSFSNANTHSD
STLSPEQEMSSPRVRDGPGRYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHRVCLS
ESPPKDLGYIYFYRRLPSC
NT seq 2580 nt   +upstreamnt  +downstreamnt
atggccacggatctgggcgagctgctggtgccgtacatgcccaccatacgggtgccgaga
tcaggagacagagtgtacaagagcgagtgcgccttttcctatgactctccggaatcagaa
ggtgggttgtatgtgtgtatgaacacattcctgggctttggaagagaacacgtggagaga
cattaccgtaaaactggacagagcgtgtacatgcacttaaaacgtcatgtgaaggagaaa
gccacaggtgctgctgggggtgccgtgccaagaagacggaatggaaaagtatttttagat
ttagaacttaaccgtgactttaacggggatgattttgaatatgaagacgaagccaagctt
gtcatattcccagaccactatgagatccctttaccaaatatcgaggagttgcctgccctg
gtgacaattgcttgtgatgcaatacttaacgctgcttctgcatataaaaagcaagaacaa
gattcatgggaggaggagcttcaagtgtccaagcatgccagaagcctcagacaacaagag
aacggggttcggattcctcccagtggctggaaatgtgccaagtgtgaaatgcgagagaac
ctgtggctgaacctgacagatggctcggtcctctgtgggaaatggttcttcgatggaagc
ggcgggaacggacatgccctcgaacactacaaagaaaccaaattcccacttgcagtcaag
ctagacaccatcaccccagatggagcagatgtttactccttcgatgaagaagaggcagta
cttgaccctcacatagcagaacacttgacacacttcggaatagacatgctaaagatgcaa
aggacggagaatggccaccacacagacaatcatgtgcagcctcgagccactgagtgggag
gtgattcaggaatcaggccttaagctgaaggcagtctatggttcagggtacacaggcctc
agaaacctgggcaacagctgctacctcagcaccactatgcaagtgctcttcagtatccct
gagttccagagagcgtatgtcggtaatctacagagaatatttgactactcgccccttgat
cctactcaagacttcagcacacaaatggcaaaactgggtcatggactactttcaggccag
tattccaaaccaccaatcaaatcagaactcattgaacaggtgatgaaagaagagtacaag
cagcagcacagagggatttcccccagaatgttcaaggctctggtcagcaaaggccaccca
gagttctcctcaaatagacagcaagatgcccaagaattctttttgcattttatcaacctg
gtagagaggaacagttctggctcagagaaccccagcgacgtgttccgcttcatcgtggag
gagcgtgtacagtgctgccagtcacagaaagtgcgttacactcaaagagtggactacctt
atgcagcttcctgtgcccatagaggctgccaccaacagggaagagctcatagcatatgag
actaagcggaaggatgctgaaaaaaacttacgggctcctccagatccagtgagggcccgc
attcccttcactgcctgtctacaagcctttaatgaacctgagaatgttctggacttctgg
agttcggcactgcaggccaagtcggctggagtgaaaacttctcgttttacaactttccct
gaatacatggttgtacagctcaaaaaattcacatttggagtggactgggttccaaaaaag
ttagatgtttctgtagacatgcctgactttatggacttgaatcggttccgggctacaggg
ctccaagcaggtgaagaagagctccctgaccttacgcctcctattgtcattcctgaggac
ataagagacagctcagtgaataattctttggaatctcccgaaatagatgaggcctctgtg
atgcagttggcagaaatgggcttccctctggaggcctgccggaaggctgtgtactacact
gggaacatgggagctgaaatggcatttaactggatcattgctcacatggaggagccagac
tttgctgagcctcttgcgattccttcatatatggaggcagacctgcccagtgccagcttt
cctactgtcagccctctggataaccagcctcctgaagaaagcatctcaatcctcacttcc
atgggcttccccagacatcacactattcgagcgctgaaggccacgaataataacctggag
cgggctttagattggatctttactcacccagagagcgaggaggagagcgaggccatgtcc
gacatggtcgacacagagcccaatgataccagtttctcaaatgccaacacgcacagtgac
tccacgctgtccccggagcaggaaatgtctagtccacgtgttcgagacggccctggacgg
tatgaactctttgccttcataagtcacatgggaacatcaacaatgtctggtcattatgta
tgccatatcaaaaaggaaggaagatgggtcatttacaatgatcatagagtatgtttgtca
gaaagtcctccaaaagacttgggttacatttacttttaccggcgcctgcccagctgctag

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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