KEGG   Ictalurus punctatus (channel catfish): 108273176
Entry
108273176         CDS       T04658                                 
Symbol
chpfb
Name
(RefSeq) chondroitin sulfate synthase 2
  KO
K00747  chondroitin polymerizing factor [EC:2.4.1.175 2.4.1.226]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ipu01100  Metabolic pathways
Module
ipu_M00058  Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    108273176 (chpfb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ipu01003]
    108273176 (chpfb)
Enzymes [BR:ipu01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.175  glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
     108273176 (chpfb)
    2.4.1.226  N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
     108273176 (chpfb)
Glycosyltransferases [BR:ipu01003]
 Glycan extension
  O-Glycan
   108273176 (chpfb)
SSDB
Motif
Pfam: CHGN Fringe
Other DBs
NCBI-GeneID: 108273176
NCBI-ProteinID: XP_017337738
Ensembl: ENSIPUG00000013105
UniProt: W5UBB7
Position
12:8731986..8745269
AA seq 767 aa
MRIATLISLARPIGPVVVGISLGFTLSLLSVTWVDESCGYGAVAVTEEAPVAASGGAKGA
RKPSSIAAGNAEEDDFQPKIVPYNKPAQQGPPKKVFRAKYASTELGIHERLFVAVVTSKN
SLNTLAVAVNRTLNHHLDGRLIFFTGSHNRKVPHGMFVVAHGHEHPVPNMFQTVQYLLEH
HVAEYDWFFILQDDTYIQPDRLKTLVGHLNMDLQLYMGHPGEFIGGEAQGRYCHGGSGFL
LSRALLLKLKPFLERCRTDIVSVRPDEWLGRCIIDHAGISCVKEHEELHYNYFEMRNTMD
LSGDESPDFQNALSVHPVSNPEQMYRLHRYFTERELQKTYEEIKKLQAEIKNISHLAVDG
NRSTAWPVGVPPPFMPKSRFEVLRWDYFTEEQLFSCADGSPKCQLSGADRADVDDVIKVA
VAELNKKYSPVLQMSAPQLVNGYRRFDPTRGMEYTLDLQLRAETESGSGHLVSRRVHLLR
PLSRVEIIPMPYVTEATRVHILLPLTSADRTTVVRFLDRCTSGLFEPAENAILSFLFLYE
PAEAQKVGTDDVFAEVKAKVAAIERRFPNVKVPWISVKTENPGLLRVLDVVSRKHPADTL
FLIATADTALNSEFLNRCRMNAISGWQVFFPIHFQDFNPRVAYPDQALPTATDLVREAGH
FDRYSFEEACFYNGDYMSARAHMEADAHEDEELLESLDTYDVFVRYSGLHVFRAVEPALR
QEYRNRTCDARLSEDTFHRCLQSKRESIGSRSQLAMLMFEQEQGNST
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgcggattgcgacgctgatctctctggcgaggccgatcggcccggtggtggtaggcatc
tctctgggcttcactctcagcctgctcagtgtcacatgggtggacgagagctgcgggtac
ggcgccgtcgctgtgaccgaggaggcgccggtggccgcgtccggaggtgcgaagggagcg
cgcaaaccgagctcgatagcagcgggcaacgccgaggaggacgactttcagcccaaaata
gtgccgtataacaagcccgcccagcaaggtccgccgaagaaagttttcagagccaagtat
gccagcacagagctgggtatccatgaacgtctcttcgtagcagtcgtgacatccaaaaac
agcttgaacacattggctgtggcagttaacaggacgctgaatcaccatctggatggccgc
cttatctttttcaccggctctcacaaccgtaaagtccctcacgggatgtttgtggtggcc
cacggtcatgagcatcctgtgcccaacatgttccagacggtgcagtacctcctggagcac
catgtagcagagtatgactggttcttcatacttcaggatgacacttacatccagcctgac
agactgaagacgctggtgggccacttgaacatggacctccagttgtacatgggccaccca
ggggagttcattggaggtgaagcccagggaaggtactgtcatggaggctcaggtttcctc
ctgtccagggccttattgctgaagcttaagccgttcttggagcgttgcagaactgacatt
gttagtgtcaggcctgacgagtggctggggcgttgcatcatcgatcatgctggcattagc
tgtgtgaaggagcacgaggagcttcattataattactttgagatgagaaacaccatggac
ctgagtggagatgaaagcccggacttccagaacgctctctcggttcaccctgtgagcaac
ccagagcagatgtatcgcctgcacagatacttcacagaaagagagctacagaaaacctat
gaagagatcaagaaacttcaggcggagataaagaacatcagccacttggctgtggacggc
aacaggagcacagcatggcctgtaggagtcccaccaccgttcatgcccaagagtcggttt
gaggtccttcgctgggactatttcacagaagagcagctgttctcctgtgctgacggctcg
cccaagtgccagctgagtggcgccgaccgtgccgatgtggatgatgtcattaaggttgct
gtggctgagctgaataagaaatactcacctgtgctgcaaatgagtgccccacagttagtc
aatggctaccgccgctttgatccaacccgcggcatggaatacacacttgaccttcagctc
cgggctgaaaccgaatcgggctccgggcatttggtgtcacggcgcgtccatttgcttcgg
cccttaagccgagtggagatcatccccatgccgtatgtgactgaggcaacacgggtacac
attttgctgcccctaactagtgcagaccgtaccacagtggttcgattcctggatcgctgc
acttcaggtctgtttgagccagctgagaatgcaatactcagcttcctcttcctctatgag
cctgcagaggcacagaaagtgggcacagatgatgtttttgcagaggtcaaggcaaaagta
gctgcaatagaacggcgctttcctaacgtcaaagtgccatggatcagtgtgaagacggag
aatcctggtcttctgcgtgttttggatgtggtatcgaggaagcacccagcagacacgttg
tttttgatagctactgctgacacagcgctcaactccgaattcctgaatcgctgccggatg
aatgctattagtggctggcaggttttcttccccattcattttcaagacttcaacccacga
gtggcgtatccggatcaggctctgcctacagctacagatttagtgcgtgaggcgggccac
ttcgaccgctattcttttgaagaggcgtgcttctacaacggtgactacatgtctgctcgt
gcgcacatggaagccgatgcgcatgaggacgaggagctgctggagagcctggatacctat
gatgtgtttgtgcgttattcaggcctgcacgtgttccgtgccgtggagcctgcgctgcgc
caggagtaccgaaatcgcacgtgcgatgcacgactgagcgaggacaccttccaccgttgc
ctccagagcaaacgtgaaagcatcgggtcccgctcccagctcgccatgctcatgttcgaa
caagagcaaggcaacagcacctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (8)   
   KEGG ENZYME (2)   
   KEGG REACTION (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (59)   

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