KEGG   Ictalurus punctatus (channel catfish): 108273304
Entry
108273304         CDS       T04658                                 
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108273304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108273304
Spliceosome [BR:ipu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108273304
 Complex B
    108273304
 Complex C
   U2 SnRNP specific factors
    108273304
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 108273304
NCBI-ProteinID: XP_017337957
Ensembl: ENSIPUG00000011603
UniProt: A0A2D0S5F8
Position
12:complement(22001609..22011383)
AA seq 501 aa
MESILEQQRRYHEEMERLMDAKTKEMLHKKTTLRDQINSDHRTRAMLDRYMEVSANLRDG
YEDKDGLRKEELSAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELMKARDNL
SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKGSEKLEYVSYLSSFDQLFDISKDRKNA
EYKRYLEMLLDYLQGYTDRVKPLLDQNDLYGKVLMDFEKKWENGTFPGWPKEASSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSL
FAKNPKAKGPKKDTERNKEIGFLEAQIYEYVEVLGEQRQLTHENVQRKQARTGEEREEDD
EEQPSESESEDEDNEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPK
AFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWSKLKSQKALERWQPDTEEEYE
DSSGNVVNKKTYEDLKRQGLL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggagtctattttagagcagcaacgtcgctatcatgaggagatggagagattaatggac
gccaaaacaaaggagatgctacacaagaaaacgacgttacgtgaccagattaattctgat
catcgtacacgagccatgttggacagatacatggaagtgagtgcaaacctcagagatgga
tatgaggacaaggatggtttgagaaaggaagagctgagcgccatatccgggccaaatgag
tttgctgaattctataaccggctgaaacagattaaggaattccacaggaaacatccgaac
gagatctgtgtgcccatgtcggtggagttcgaggagctgatgaaggctagagacaacctc
agcgaggaagcacagaatctagtagagttcactgatgaggaaggatacggccgctatcta
gacctccacgactgctacctgaaatacatcaatctaaaaggatcagagaaactggagtac
gtctcctatttgtcatccttcgatcagctctttgatatctccaaagacaggaagaacgcg
gagtataaaaggtatctggagatgctgctggattacctgcagggttacacagaccgagtg
aagccgctgctggatcagaacgatctgtacgggaaagtgctgatggactttgagaagaag
tgggagaacggcacttttcctggctggccgaaagaggctagcagtgctctgacccacgcc
ggagctcatctggacttgtctgccttctcctcctgggaggagttggcatcactgggtctg
gacaggttaaagtctgctctcatggctctgggattaaagtgcggtggcacactcgaggaa
agagcacagaggctgttcagcactaaagggaaatctctggagtcactggatccttccctg
tttgccaaaaacccaaaagccaagggaccaaagaaagacacagagcgtaacaaggagatc
ggattcctggaggcccagatttatgaatacgtggaggttttgggggagcagaggcagctg
acacacgagaacgtccagaggaagcaggctcggacaggcgaggagcgcgaagaggatgac
gaagagcagcccagtgagagcgagagtgaagacgaggacaatgagatcatctacaatccc
aaaaacctgccgctgggctgggacggcaagcccattccatactggctgtacaagcttcat
ggcctaaacatcaattacaactgtgaaatctgtgggaactacacatacagaggacccaaa
gccttccagagacactttgccgagtggagacatgcgcatggcatgcgctgcttgggcatc
cctaacaccgcccactttgccaacgtcacccagatcgaagacgcagtgtccctttggtca
aagctgaagtcccagaaggcattagagaggtggcagcctgacacagaggaggagtatgag
gactccagtggaaatgtggtcaacaagaagacgtatgaggatctgaagaggcaggggctg
ctttag

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