KEGG   Ictalurus punctatus (channel catfish): 108277687
Entry
108277687         CDS       T04658                                 
Symbol
wu:fb16f03
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1 isoform X1
  KO
K03260  translation initiation factor 4G
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108277687 (wu:fb16f03)
   03012 Translation factors [BR:ipu03012]
    108277687 (wu:fb16f03)
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     108277687 (wu:fb16f03)
   mRNA cycle factors
    Stress granule specific factors
     108277687 (wu:fb16f03)
Translation factors [BR:ipu03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    108277687 (wu:fb16f03)
SSDB
Motif
Pfam: MIF4G MA3 W2 eIF4G1-like_eIF4E-bd Cep57_MT_bd Cullin
Other DBs
NCBI-GeneID: 108277687
NCBI-ProteinID: XP_017345987
Ensembl: ENSIPUG00000018901
UniProt: A0A2D0STG8
Position
Unknown
AA seq 1650 aa
MNKVPGPLSSSPLPAPSPNLPQPNFSPTPPPSMVFATPTPPQMNPTAPTRQPYYPVRPAL
PTNPARAQASSAPRPIPPPHGTHTPHVFQPGSQMMMIPSQTISFPNSQGPAYYIPGQYRP
SYVSPQQYQVAGSPNFYPGSSPAEYAGAYYPAQPQFTPPVAPAPVLINPAPQQQQAPPPP
QHAAPAKRERKQIRIRDPNQGGRDITEEIMSGGRSASTPTPPQSALPMSEGGAITESNGE
KSTPSVTAARADDRVQPVVSLEFPIPPGESPIPDAPPTPPPTSPISDTVDALLPGMEEAM
QPKDAKQQEPKSSSGEVPSNINGSTENGVEPAAVSIHLPVLGAEPALESPIAQPEELQLV
NGLTADANRDVSPLAEPDVNKEAPPIIEECSTWTTKTAPPVVRETPAQVVSETAPLPAIK
ESCVPSVKEMPALKPTPTPVVAEISTPVVTETLSGVAKDTTSSAVKEIPGPVAKVTPAPV
ILETLVAKETPSPVATLTNEPIVKETVVEEPCPVTMEIPEPIVKETPSPPAPVCVAAKAT
PPPAPDRVDTPPPPTTAPESTMQAVSVPKKKRKLKDLNKKETGDVLDAFKEPPPPKPEAM
APVKSEQAEPAPVAPPPAEEVEETWEEKEDKLDAENIQPPTSPAPATPTEQKYQYKEEQW
KPLNPEEKKKYDREFLLGFQFISASMHKPEGLPHISDVVLDKVNKTPLRPLDLSRMNCGP
DFTPSFANLGRQPVGGRGLTVGLPGPRRSGQSGSRKEPRKIVLSGVSLNDDIQLNKAEKA
WRRGGGADSDDPESVKTRELLRRVRGVLNKLTPQMFQPLMKQITEMTIDTEERLKGVIDL
VFEKAISEPNFSVAYANMCRCLMGLKVPITDKLGVTVNFRKLLLNHCQKEFEKDKDDDVT
FEKKQKELDAATDEELRQRLKEELEEAKDVARRRSLGNIKFIGELFKLKMLTENIMHDCV
VKLLKNHDEESLECLCRLLSTIGKDLDFEKARPRMDQYFNQMGKIIKERKTSSRIRFMLQ
DVIDLRRNNWVPRRGDQGPKTIEQIHKDAEMEAQREQIKVQQQLLFKKEGRGGGGVTLGP
RGVGPASHRGNPPPDDGWNTVPISTKNRPIDTTRLSKITKPGALDFNNQLLAPGGKGSWG
SWGRGSSGGSGAKPSDGAQDSSRPSTLNRFSALQQPPSSSSSSSSNMDTDRRVPQRSGSS
RERGDRLERGSDRNRPAISKRSFSREKDEWEQRPAETVRRVASMTDERERARERERERER
ERAPSKDSVKREPVSTSPSAPSKPALSPEELEKKATAIIEEYLHINDMKEALQCVSELNS
ASLLDVFVRTGIESTLERSTITREHMGLLLHQLVKAGTLSTQQYYKGLMEVLEVAEDMAI
DVPHIWVYLAELITPILHEGGIPMGPLFREVSKPLVPIGKAGALLAHILTLLCKGMSHKK
VGAMWREAGLSWKDFLSEDEDVNKFVTEKGVDYTLGEECVKVGSSRKSLSMEEISKQLDQ
LLQDKSDNNRIYNWVEANLDEQQASSNTFVRALMTSVCQAAIICETPYKVDSKEISQRAK
LLQRYIKDEQKELQALYALQSLMVQMEQPPNLLRMFFDVLYDEDIIKEDGFYKWESSKDP
AEQQGKGVALKSVTAFFTWLREAEDESDNS
NT seq 4953 nt   +upstreamnt  +downstreamnt
atgaataaagtaccaggacccctgtcctcttcccccctccctgcaccctcccctaacctg
ccccagcctaacttctcacccactccacccccatctatggtttttgccacgcccactcct
cctcaaatgaaccccacagcccctacccgacagccgtactacccagttcggcctgcatta
cccacaaacccggcccgagcccaggcaagctccgccccccggccgatccctccaccacac
gggacacacacccctcacgtcttccagccaggctcccagatgatgatgatcccatcgcag
acaatcagctttcctaactcacaagggcccgcctactacattcctggtcagtaccgcccc
tcgtatgtgtctcctcagcagtaccaggtcgctgggtctccaaacttttatcctggaagc
agtccagctgagtacgctggagcgtactaccccgcccagccccaattcacgcctcctgta
gccccggcacctgtcttaataaaccctgccccccagcaacagcaagccccgccccctcca
cagcacgcagcaccagccaaacgagaacgcaaacagataaggatacgagaccctaatcaa
ggaggcagagacatcacggaggagatcatgtccgggggccgcagcgcctccacacctacg
cctccacagtcggctctgcccatgtcagagggcggagccatcacagagtctaatggtgag
aaatccacgccttctgtcacagcagccagagcagatgacagggtacagcctgtagtgtcc
ctagagttccccattcccccaggggaaagccctatcccagatgctccgcccaccccgcct
cccactagcccaatcagtgacactgttgatgccctgcttcctggcatggaagaagccatg
caacccaaagatgcaaaacagcaggagccaaagtcctcatcaggagaggttccttcaaac
attaacggttctactgagaatggggtggagccagcagcagtgtctattcatcttcctgtt
ttaggggcggagccagcactggagtctccaatcgcacagccagaggagctgcaacttgta
aacggtttaactgcagatgccaacagggacgtcagccctcttgccgagcctgacgtcaac
aaagaggctccacccattatcgaggaatgctcaacatggactaccaaaactgctcctcct
gtcgtcagggaaacccctgctcaggtcgtcagcgagacggcgccacttccagccatcaag
gaatcttgtgtcccgagtgtcaaagaaatgccagctcttaagccgacgcccactccggtc
gtcgctgagatttccactcctgttgtcacagaaaccctgtctggtgttgccaaggatacc
acctcatcagctgtcaaagagatccctggaccagttgccaaggtaacccccgctccagtt
atcctggagactctggttgcaaaggagacgccttctccagttgccacattaaccaacgag
cctattgtaaaagaaactgttgtcgaggagccttgtcctgttactatggagatcccagaa
ccaatcgtcaaggaaaccccaagtccccctgcacctgtgtgtgttgctgctaaagccacg
cctcctcctgctcctgaccgagtagacacgccccctccaccaacaacggctccggagagc
actatgcaagctgtttctgtgccaaagaagaagaggaagttgaaggacttaaacaagaag
gagactggtgatgtgctggatgcctttaaagagccaccaccaccaaagccagaggccatg
gccccggtaaaatcagagcaggctgagcctgcccctgtagctccaccccctgcagaagaa
gtggaggagacatgggaggagaaggaggataagctcgatgctgaaaacatccaaccgccg
acgagtcctgcaccagccacgcccaccgagcagaaataccagtacaaagaggaacagtgg
aaacctctgaaccctgaggagaagaagaaatatgaccgagagtttctgctgggctttcag
ttcatcagtgctagcatgcataaaccagaggggctaccacacatcagtgatgtggtgctg
gataaggtgaataaaactcctctgcggccgttagacctgagcaggatgaactgcggtcca
gacttcaccccctcattcgctaacctgggcagacagccagtcgggggacggggcctgaca
gtgggtttgcccggcccaaggcgctcaggtcagtccggatcccgtaaggagccgaggaag
atcgtcctgtccggcgtgtcccttaatgacgatattcagctgaacaaggcagagaaggcg
tggcggcgtgggggcggagctgacagcgacgacccggagtcggtgaagacgcgggagctg
ctgcggcgtgtgcgaggtgtcctgaacaaactgacccctcagatgttccagccgctgatg
aagcagatcacggagatgaccatcgacaccgaggagaggctgaagggtgtgatcgacctg
gtgtttgagaaggccatctccgagcccaacttctctgttgcctacgctaacatgtgtcgc
tgcctcatggggttgaaagtacctatcactgataagctgggagtgacggtgaatttccgg
aagcttctgctaaaccattgccagaaagagtttgagaaggacaaggatgatgacgtgaca
ttcgagaagaaacaaaaggagctagatgctgccactgacgaggagctgcgtcagcgtctg
aaggaggagctagaagaagcgaaggacgtggcccggcgccgctcactcggcaacattaag
ttcatcggcgagctcttcaagctgaagatgctcacggagaacatcatgcacgactgcgtg
gtcaaacttctgaagaaccacgacgaggagagcctggagtgtctgtgcagactgctgtct
accatcggcaaggacttggacttcgagaaagccaggcctcgtatggatcagtattttaac
cagatggggaagatcattaaagagaggaagacgtcatctagaatccggttcatgctgcag
gacgtcattgacctgagacggaataactgggtgcccaggcgaggagatcagggccccaag
acgatcgagcagatccacaaggacgccgagatggaggcgcagcgagagcagataaaagtc
cagcagcagctcctcttcaagaaggagggacgaggaggaggaggtgtgaccctgggccct
cggggtgttggccccgcctcacaccgtggcaacccaccaccagacgatggctggaacacg
gtgcccatctccaccaagaaccgtcccatcgacaccactcgcctcagcaagatcaccaag
ccgggagccctggactttaacaaccagctacttgcccccggtggcaaaggatcatggggc
agctggggcagagggagcagtggaggctcaggggctaaacccagtgatggtgctcaagac
tcgagccgtccgagtacactgaatcgcttctccgccctccagcagcctccttcctcctcc
tcatcttcttcctccaacatggacacagacaggagagtgccacaaaggagcggctcgagt
cgagagcgtggtgaccgcctcgaacgtggttcggaccgaaaccgacccgccatcagtaag
cgcagcttcagccgagagaaagacgagtgggagcagagaccggccgagacggtgcgtcga
gtcgccagcatgactgatgagcgggaacgagcaagagagcgtgaacgagagagggagcga
gaacgggcacccagcaaagacagtgtgaaaagagaacctgtctccacatcaccttctgcg
ccatctaaaccagctctaagccctgaggaactcgagaaaaaagccactgccatcatcgag
gagtacttacacatcaatgacatgaaggaggcgttgcaatgtgtgagcgagctgaactcc
gcatcgctgctcgatgtgtttgtgaggacaggaatcgagtcgactctggagcgcagcacc
atcaccagagagcatatgggcttactactgcaccaactggtcaaagctggaacgctgtcc
acacagcagtactacaaagggctgatggaggtgctggaggtggctgaggacatggccatt
gacgtgccacatatctgggtttacctggctgagctgatcactcccatactgcatgaaggt
gggattcccatgggcccgctcttcagggaagtgtctaaacctctggtacctatcggcaaa
gctggagctcttctagcacacatcctcaccctgctctgcaaaggaatgagtcataagaag
gtcggagctatgtggagggaggcggggcttagctggaaggatttcctgtctgaggatgaa
gatgtcaacaagtttgtgaccgagaagggagtggactacacactgggtgaggagtgtgtg
aaagttggtagcagtaggaaatctctgagtatggaagagatctccaaacagttggaccaa
ctgctgcaggacaaatctgacaacaaccgcatatacaactgggtggaggcgaacctggac
gagcagcaggcttcatcgaacacctttgtgcgagctctgatgacctccgtgtgtcaggct
gctatcatttgcgagaccccgtataaagtggactcgaaagagatttcccagagggccaag
ctgctccagcgctacattaaggacgagcagaaggagctgcaggcgctctacgcgttacag
agcctcatggttcagatggagcagccgccgaacttgctgcggatgtttttcgacgtgctc
tacgacgaggacatcattaaggaggacggcttctacaagtgggagtcgagcaaagatcca
gccgagcaacaaggaaagggcgtcgccctcaaatcagtcaccgcctttttcacttggctc
cgcgaggccgaggacgaatcagacaacagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (77)   
   KEGG ORTHOLOGY (1)   
   RefGene (72)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (98)   

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