KEGG   Ictalurus punctatus (channel catfish): 108278538
Entry
108278538         CDS       T04658                                 
Name
(RefSeq) terminal nucleotidyltransferase 4A
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108278538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108278538
   03016 Transfer RNA biogenesis [BR:ipu03016]
    108278538
Enzymes [BR:ipu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     108278538
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     108278538
Transfer RNA biogenesis [BR:ipu03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    108278538
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 Polbeta TUTase RseA_C PI3K_1B_p101
Other DBs
NCBI-GeneID: 108278538
NCBI-ProteinID: XP_017347509
Ensembl: ENSIPUG00000000878
UniProt: A0A2D0SXU8
Position
1:complement(4724339..4735418)
AA seq 753 aa
MDPRVAWIQPEQKGPANALWMHIWETSHGLRTTNTSQSPRLNPAMAPGLVKTSSSSCISP
HPLQVSPGFILTPPFDHSSITALNGTCTGAAKPSASPKNGSLSPSSSSLDSETDSPKSDS
CDSTSTHHSHPRLFFSFNEQLHNINDYLHQHQQQHLHLQAHLHHHHNHHYHHRHPSQHFP
QAPDHHHPAKKKGENKASSYGVNYLLSNSNGNLFCTGTPWKTRRYSPGVNGLHEEIVDFY
AFMSPRPEEEAMRRDVVNRIESVIKNLWPAANVQIFGSFSTGLYLPTSDIDLVVFGKWER
PPLQQLDQALRQQNLAQPFSIKILDKATVPIIKLTDRETEVKVDISFNVETAVKAARFIK
DHLKKYTVLPYLIFVLKQFLLQWELNEVFTGGISSYCLILMAISFLQLHPRIDCRATNIN
LGILLIEFFELYGRHFNYLKTGIRVKNGGAYLAKEEMMKAMSSGHRPSMLCIEDPNLPGN
DVGRSSYGALQVKRVFDYAYIVLSHAVSPLARAYPNKDNDSTLSRILRLTQEVINYREWI
IQKWGDRHNARINRCIVQFGGDSEEQQRDSVSPQSADSLMSLSSPQQHSSSSSASSVSSL
SGSDIDSDSVQSGHKAPHQTFPAYPVPSTLPRPQSGTSPPETASSNGQVRKPLPMSLPPP
VPGRPLCVEGCVALSNGYRLSSPIYLGPLAGLQNQPKFHNVQRFGPKVPGVFEPASMPAP
RASLPQHNRNTWHRGGGKRRPPASADRTATGQR
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggaccccagggtggcttggatccagcccgagcagaaaggaccagccaacgcgttgtgg
atgcacatctgggaaacctcacacggtttacggactactaatacctcacagagccctcgt
ttgaacccggccatggcgccaggcttggtgaaaaccagctcctccagttgtatcagcccc
catccccttcaggtttctccgggcttcattctcacacctccgtttgatcactcttctatc
acggcactgaacggcacttgcacaggagcagcaaagccgagtgcttctcccaaaaatggc
tccctgtctccatcgtcctcctcgctggactctgagacggacagtcccaaatcggactcg
tgtgacagcacaagcacgcaccactcccatcccagactcttcttcagcttcaatgagcag
ctgcacaacatcaatgactacttgcatcagcaccaacagcagcatttgcatctccaggca
catctacaccatcatcataatcaccattatcatcaccgacatccttcccagcacttccct
caagcgcctgatcaccaccatccagccaaaaagaagggtgagaacaaggccagctcttac
ggggtcaactacctgctctccaactccaatgggaacctcttctgcactgggacaccatgg
aagaccaggagatacagtccaggggtgaacggccttcatgaagaaattgtggacttctat
gccttcatgtccccgcgtcctgaggaagaggccatgaggagggacgtggtgaaccgcatc
gagagcgtgatcaagaacctgtggcctgcagctaacgtccaaatattcggcagcttcagt
accggactttatctcccaacaagtgacattgacctggtggtgtttggaaagtgggaacgt
cctcctctacagcagctcgatcaggctctgaggcagcagaacctcgcccaaccgttctcc
attaaaatactggacaaagccacggttcctataatcaagctgacggaccgagagactgag
gtgaaggtggacataagttttaacgtcgagacagctgtgaaagcggcgcgtttcatcaaa
gaccacttaaagaagtacaccgtgctgccgtacctgatcttcgttttgaagcagtttctg
ttgcagtgggaattaaacgaggtgttcacaggaggcatcagctcctactgtctcatatta
atggccatcagcttccttcagctccacccccggatcgactgccgggcgaccaacataaac
ctgggcatcctgctgatcgagttcttcgagctgtacggtcgccacttcaactacctgaaa
acggggatccgtgtgaagaacggaggagcgtacctcgccaaggaggagatgatgaaggcc
atgagcagtggccaccgaccctccatgttgtgtatcgaagatcccaacttaccgggcaac
gacgtgggccgcagctcttacggcgccctgcaggtgaagcgcgtgttcgattacgcctac
atcgtcctgagtcacgccgtgtctcctctcgcccgcgcttatcccaacaaggacaacgac
agcacactcagccggatcctccgactgacccaggaagtgattaactacagggagtggatc
attcagaagtggggggacagacacaatgccagaatcaaccgctgcatcgtccagttcggc
ggtgactccgaggagcagcaaagggactctgtgtctccacaaagtgccgattccctcatg
tcactatccagtccccagcagcactcctcatcatcttcagcctcttctgtttcctcgctc
tcaggaagtgacatcgactctgactccgttcaatctggacacaaagccccgcaccaaact
ttcccagcataccctgtgcccagcactctgccgaggccacaaagcgggacaagtccgcct
gaaaccgcttcctctaacggacaggtgcggaagcccctccccatgtctctacccccacct
gtaccaggcagaccactgtgtgtggaggggtgtgtggcactgagcaacggctaccggctg
tcctcgcccatctacctcggcccgcttgctggcctccagaaccagcccaagtttcataat
gttcagaggtttggcccgaaggttcccggtgtcttcgagcctgcttcgatgcctgcgcct
cgcgccagccttccacagcacaaccgaaacacatggcacagaggaggagggaaacggcgc
cctccagcctcagcagatagaactgccacaggtcaaaggtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (64)   
   KEGG ORTHOLOGY (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (82)   

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