KEGG   Ixodes scapularis (black-legged tick): IscW_ISCW009943Help
Entry
IscW_ISCW009943   CDS       T01131                                 

Definition
laminin gamma-1 chain, putative (EC:2.7.10.1)
Orthology
K05635  
laminin, gamma 1
Organism
isc  Ixodes scapularis (black-legged tick)
Pathway
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:isc00001]
 Environmental Information Processing
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    IscW_ISCW009943
Cell adhesion molecules and their ligands [BR:isc04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      IscW_ISCW009943
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      IscW_ISCW009943
     Laminin-2 Extracellular matrix (ECM) components
      IscW_ISCW009943
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      IscW_ISCW009943
   VLA-3
      IscW_ISCW009943
     Laminin-10 Extracellular matrix (ECM) components
      IscW_ISCW009943
     Laminin-11 Extracellular matrix (ECM) components
      IscW_ISCW009943
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      IscW_ISCW009943
     Laminin-8 Extracellular matrix (ECM) components
      IscW_ISCW009943
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      IscW_ISCW009943
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      IscW_ISCW009943
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
VectorBase: 
UniProt: 
AA seq 1278 aa AA seqDB search
CNCNGRSRKCYFDKELYDRTGHGGHCINCSDNTDGPNCERCRENFYQRSDGRCVACGCDP
LGSRVLQCNSKGQCPCKPGVEGQRCDRCAPNFYDFSEQGCRPCGCSMAGSVDSPPSCDAA
TGVCRCKANVEGRQCDRCRPGFFNLQRDNEFGCTPCFCFGHSAVCQSAPGYSKHTVYSTF
TRDKEHWKAVDSRGARVPTRHEYAAHHLAVAAPGENQVYFVAPERFLGDQRGSYNQNLTF
TLRIGEEGARSSLEDVVLESPSQSVSQHIFGQGNPLPSIRNQDYRFRLHQDSRYGWSPTL
SAHEFMALLANLTAIKIRATYLPRGESTLHRLVCGGKKGVGGLPGIGQGILIPPDKFCDP
SEYTTSSCRATLQHHTFRVSNRYGCPRQTNPRHWCSSLGHCICQHNTAGEFCERCAPRFY
GNALVGSPEDCQPCPCPDQGACAVLPDESVVCLECPQGYSGGRCDLCFDGHFGDPQGRYG
AERPCQKCDCNDNVDPNAVANCNTTTGECLKCIYKTAGFHCEKCLPGHYGDALAVPKGDC
KRNMQLLSLGSTSDQCDPVTGQCPCRPNVAGRECGQCREGTWNLEGGQGCEQCGCHLVGS
VNRTCDQRTGQCHCRPGVGGKRCDQCLPYHYGFSPDGCLPCDCDSLGSVSLQCAPDGQCE
CRPNVEGRRCERCKENKYNREAGCVDCPTCYNLVQDAVNQHRDKVADLARLLDNIEKNPQ
IVKSVDFEKKLEEVMVIVNDLWKDAKQASGTDKSLADRLEELVRRMHRVQETASKVGQET
WLAEEALWAAQSNLSQAEASVERMGTTLAQAHRFLEDEGQHALRRALERSHRFGQQSEMM
SQIARDARQLADRMKDIMDLMLRTKKMAEEAKAEVVKAYEDALRVYSDTTSVQMPDIDTD
DLLHQAQEIIEEVRQPLGRAISSLYDCAIEQQNHSQCCEKEPRSGQKGSKPQRSFTFKMQ
AQRIYKEADDLMEKHKNIFDKVKPQKDEAEDLLAEAQRQQQVTDELLADTDAAYAKAKEA
VQSGEKILEEAQNTLKTLKEFDENVKNSKEKARAALERVPEIRALIEEAENKTADARDAL
KDAEEDANAASDIATQAERIAEQASKVRHERLAKTMAATTLTSRACRKGGRRAYKLQAAT
EDHFAVYRPKRHNKISCNLRFKFSKDATSLKLRGNMKSADLRRWGERLSPVPVAANVDEV
DPGRLDELERRLAEAERELERARLAERLAELQKAREQQVLWMRDYEDEINQLKKDVANVR
LISEALPDKCYRRIRLEP
NT seq 3837 nt NT seq  +upstreamnt  +downstreamnt
tgcaattgcaatggccggtcccgcaagtgctactttgacaaggagttgtacgaccgcacg
ggccatggcggccactgcatcaactgcagcgacaacaccgacggccccaactgcgagcgc
tgccgggaaaacttctaccagcgcagtgatggccgctgcgttgcctgcggctgcgacccc
ttggggtcccgtgtgctgcagtgcaacagcaagggccagtgcccgtgcaagcccggcgtg
gaagggcagcgctgcgaccgctgtgctcccaacttttacgacttttcggagcagggctgc
aggccgtgtggctgcagcatggccggcagcgtggacagtcctccttcgtgcgacgctgcg
acgggcgtctgccgttgcaaggccaacgtggaggggcgccagtgcgaccgctgccgcccg
ggcttcttcaacctgcagcgggacaatgagtttggctgcaccccgtgcttctgcttcggc
cactcagctgtctgccagagtgccccgggatactccaagcacaccgtctacagcaccttc
accagggacaaggagcactggaaggcggtggactcccggggtgcccgagtgcccacccgg
cacgagtacgccgcccaccacttggccgtggctgctcctggcgagaaccaggtctacttc
gtggcaccagagcgtttcctgggcgaccagcggggctcgtacaaccagaacctgacgttc
acgctacgcattggggaggagggtgcccgctcgtccctggaggacgtggtgctggagagc
ccgtcgcagagcgtgtcgcagcacatcttcggccagggcaacccgctgccctccatccgc
aaccaggactaccgcttccggctgcaccaagactcccgctacggctggagccccaccctc
agcgcccacgagttcatggccctgctggccaacctgaccgccatcaagatcagggccacc
tacctgcccaggggtgagagcacgctgcaccgcttggtttgcggaggaaaaaagggtgtg
ggtggtttgcctggcatcggccagggcattttgatacctccagacaagttttgtgaccct
tcagaatatacaacatcaagctgtagagcgaccttgcaacatcacacttttcgtgtgtcc
aatcgctacggctgcccccgacagactaacccccgccactggtgttcctctttaggccac
tgcatttgccagcataacacggcaggggagttttgcgagcggtgcgctccccgcttttac
ggcaacgcactagtgggcagccccgaggactgccagccgtgcccgtgccccgaccagggg
gcctgcgcggtgttgcccgacgagagcgtcgtctgccttgagtgcccccagggctactct
ggtggacgatgcgacttgtgctttgacggccactttggcgaccctcagggaaggtacggg
gcagagaggccctgccagaaatgtgactgcaacgacaatgttgatcccaacgctgttgcc
aactgtaacaccaccaccggggagtgcctgaagtgcatatacaagacggccggcttccac
tgtgagaagtgccttccaggacactatggagacgccctcgccgttcccaagggagactgc
aaacgtaacatgcagctgctcagcctgggctctacaagcgaccagtgcgacccggtgacg
ggccagtgcccgtgccggcccaatgtggccggacgtgagtgcggccagtgccgcgaggga
acctggaacctggaagggggccagggctgcgagcagtgcggctgccacctggtgggctcc
gtgaaccgcacttgcgaccagcgcacgggccagtgccactgccggccgggggtgggcggc
aagcggtgcgaccagtgcctgccttaccactacggcttctcccccgatggctgcctgccc
tgcgactgcgacagcctaggctcggtgtccctccagtgtgccccggacggacagtgcgag
tgccgtcctaacgtggagggccgccgctgcgagcgctgcaaggagaacaagtacaaccgg
gaggccggctgcgtcgactgccccacctgctacaacctggtgcaggatgctgttaaccaa
cacagagataaggtggcagaccttgcgaggctactcgacaacatcgagaagaacccccag
atagtgaaaagtgtggactttgagaaaaagctggaagaggtcatggtcattgtgaatgac
ctgtggaaagatgcaaagcaagcctctggcacggacaagagcctggcggaccgtctggaa
gagctggtgcggcgcatgcaccgggtgcaggagacggcctccaaagtggggcaggagacg
tggctggctgaggaggcgctctgggccgcccagagcaacctgtcccaggccgaggccagc
gtggagcgcatgggcaccaccctggcacaggcgcatcgcttcctcgaggacgaggggcag
cacgctctgcgcagggccctggagcgctcccaccgctttggacagcagtccgagatgatg
tcgcagatcgcccgcgacgctcgccagctggccgacaggatgaaggacatcatggacctg
atgctgcgtaccaagaagatggcggaggaggccaaggcggaggtggtgaaggcgtacgag
gacgccctgcgggtgtactcggacaccacctcggtccagatgccggacatcgacacggat
gacctgctgcaccaggcacaggagatcatcgaggaggtacgccagccattggggcgggcc
atctcctcactttacgattgtgcaattgaacaacaaaatcactctcaatgctgtgaaaaa
gagcctcgtagtgggcaaaagggaagtaagccacagcgatcgttcacttttaaaatgcag
gcccagcgcatctacaaggaagcggatgacttgatggagaaacacaaaaacatcttcgac
aaggtgaagccgcagaaggatgaagcggaggatctgctggctgaagctcagcgacaacaa
caggtgacagatgagctcctggcggacacggacgcggcctatgccaaggccaaggaggcc
gtccagagtggggagaagattctggaagaagcccagaacacgctcaagacactcaaagag
tttgacgagaacgtcaagaacagcaaagagaaagccagggctgccctggagagagtgccg
gagatccgggctctcatcgaagaggccgagaacaagacggcggatgcgcgggacgcgctc
aaggacgcggaagaagacgccaatgccgccagcgacattgccacccaggcggaacgcatc
gccgagcaggcctccaaggtacgtcatgagcggttggccaaaaccatggccgctacgaca
ttgacgagtcgtgcatgcaggaagggaggaaggagagcctacaaactacaggctgcgacc
gaagatcatttcgcggtctataggcctaaaaggcataacaaaattagctgcaatcttcga
tttaaattctcaaaagatgcaacttctttaaagctccggggaaatatgaaaagcgccgat
ctgcgtcgatggggtgagaggttgagccccgttcccgtcgcagccaatgtggacgaggtc
gatcccggtcgtctggacgagctggagcgaaggcttgcagaggcggagcgggagctggag
cgggcgcgtctggcggagcggctggcggagttgcagaaagcccgcgagcagcaggtgctc
tggatgcgcgactacgaggacgagatcaaccagctgaagaaggatgtggccaacgtgcgg
ctcatcagcgaggccctgccggacaagtgctaccgccgcatacggctggagccctga

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