KEGG   Isoptericola variabilis: Isova_0300
Entry
Isova_0300        CDS       T01520                                 
Name
(GenBank) exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
iva  Isoptericola variabilis
Pathway
iva03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:iva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Isova_0300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:iva03400]
    Isova_0300
Enzymes [BR:iva01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Isova_0300
DNA repair and recombination proteins [BR:iva03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Isova_0300
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AEG43102
UniProt: F6FSW1
Position
complement(318662..319495)
AA seq 277 aa
MRLATWNVNSVRARVDRVLAYLERSGTDVLALQETKCRDDQFPTRAFEDAGYEVAHVGYS
QWNGVAIASRVGLSDVEIAFPGQPGFAKAGADPEDLLLDVPPPVEARAIGATCGGVRVWS
LYVPHGRAQGDPHLAYKLRWLDALREAAAGWLADDPAAQVALVGDWNVAPLDTDVWDPAF
FEGRTHTSPAERDAFAAFGAAGYTEVTRELLPEPHTYTYWDYKQLAFPRNYGMRIDFAYV
SPALRERVTGARIERDERKGAGASDHVPVVLDLADAG
NT seq 834 nt   +upstreamnt  +downstreamnt
gtgcgactggccacctggaacgtcaactccgtgcgggcccgcgtcgaccgcgtgctggcg
tacctcgagcgctcgggcaccgacgtgctcgcgctgcaggagaccaagtgccgcgacgac
cagttcccgacgcgcgcgttcgaggacgcggggtacgaggtcgcgcacgtcgggtacagc
cagtggaacggggtcgcgatcgcctcgcgcgtcgggctgtccgacgtcgagatcgcgttc
ccggggcagcccggcttcgcgaaggccggcgcggaccccgaggacctgttgctcgacgtc
ccgccgcccgtcgaggcgcgcgcgatcggtgcgacgtgcggcggtgtgcgcgtgtggtcg
ctctacgtgccgcacgggcgggcgcagggcgacccgcacctcgcgtacaagctgcgctgg
ctcgacgcgctgcgcgaggcggccgcgggctggctcgcggacgacccggcggcgcaggtc
gcgctcgtcggcgactggaacgtcgccccgctcgacaccgacgtctgggacccggcgttc
ttcgagggcaggacccatacctcgccggccgagcgcgacgccttcgcggcgttcggcgcc
gcggggtacacggaggtcacgcgcgagctgctccccgagccgcacacgtacacctactgg
gactacaagcagctcgcgttcccgcggaactacgggatgcgcatcgacttcgcgtacgtg
tccccggcgctgcgcgagcgcgtgaccggcgcgcggatcgagcgcgacgagcgcaagggc
gcgggcgcgagcgaccacgtgcccgtcgtcctcgacctcgccgacgcgggctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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