KEGG   Isoptericola variabilis: Isova_1213Help
Entry
Isova_1213        CDS       T01520                                 

Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
iva  Isoptericola variabilis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:iva00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Isova_1213
Enzymes [BR:iva01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Isova_1213
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Isova_1213
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1326016..1326918)
Genome map
AA seq 300 aa AA seqDB search
MPELPEVESLARFLDGRTAGRTVVAVDVAAIAALKTFDPPATALVGGRVAGAGRHGKWLD
VAVTPAAGSGGDALHLVFHLARGGWLRWRDQAPTTPVAPRLGGSSRGAALALRVRFDDGS
GFDLTEAGTRKRLAVHVVRDPQEVEQVRTLGIEPLSEDFTADALAALLTRKNQQVKGLLR
DQSAIAGIGNAYSDEILHVARFSPFKLTRSFTPEEVATLHEATVTTLRDAVAASAGRPAA
ELKDAKRRGMRVHGRTGEACPVCGDTVREVSFADRSLQYCPTCQTGGQVLADRRLSRLLK
NT seq 903 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagctgcccgaggtcgagtcgctggcccgcttcctcgacgggcgcacggccggt
cgcacggtcgtcgccgtcgacgtcgcggcgatcgccgcgctcaagacgttcgacccgccc
gcgaccgcgctcgtcggcggccgcgtcgccggcgccggccggcacggcaagtggctcgac
gtcgccgtgacgcccgctgccgggtccggcggcgacgcgctgcacctggtcttccacctc
gcgcggggcgggtggctgcgctggcgcgaccaggcgccgacgacgccggtcgcgccgcgc
ctcggcgggtcctcgcgcggtgcggcgctcgcgctgcgcgtccggttcgacgacggctcg
ggcttcgacctcacggaggccggcacgcgcaagcgcctcgccgtgcacgtggtgcgcgac
ccgcaggaggtcgagcaggtgcgcacgctcggcatcgagccgctctcggaggacttcacg
gccgacgcgctggccgcgctgctcacccgcaagaaccagcaggtcaagggcctgctgcgc
gaccagtccgcgatcgcgggcatcggcaacgcctactccgacgagatcctgcacgtcgcc
cggttcagccccttcaagctcacccgctcgttcacgcccgaggaggtcgccacgctgcac
gaggccacggtgacgacgctgcgcgacgccgtcgcggcgtcggcgggccggcccgcggcc
gagctcaaggacgccaagcgccgcggcatgcgcgtgcacgggcgcacgggcgaggcgtgc
ccggtgtgcggcgacacggtgcgcgaggtgagcttcgccgaccggtcgctgcagtactgc
ccgacgtgccagacgggcgggcaggtcctcgccgaccggcgcctgtcccgcctgctcaag
taa

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