KEGG T01520: Isova

Isoptericola variabilis: Isova_1285

Entry

Isova_1285 CDS T01520

Definition

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

iva Isoptericola variabilis

Pathway

iva00300	Lysine biosynthesis
iva00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:iva00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:iva00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase VWA_2 Corona_6B_7B

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1405038..1406639

AA seq 533 aa
MTSPLDRFRPTATRPRRVRDLALTFGLETAATGPDDVTVTSVVSDNRLTADGDLFVALAG
SRAHGARFAADAVARGARAVLTDAEGARLLGDALAGVPVLVAPDPRAVLGAVAAWVYGSP
AERLMTFGVTGTNGKTTTTYQIDHLLRALGWKGGLVGTVEMRSGDRVLASRLTTPEAADL
QALLATMVEDEVRTLAMEVSSHALALHRVDGIEFGVVGFTNLSQDHLDFHGDLQAYFDTK
ALLFTPARARRGVVVVDDAWGERMADAARIPVATLRTRPARDGEADADWTVSDVVPHGTG
SAFTLTHADGRTLRTSTSLPGGFNVANAALAAVMVLEGGAHLDDVREALDAAGGLSATVP
GRMEVVGAGGGGDPRVVVDFAHNTDALELALDALRPTTAGRLVVVFGATGDRDAGKRPAM
GAAAVSGADVVVVTDDDPHGEDPAAIRAEVLGGARAARDVAAAAGRSVEVLEVAPRAEAI
RRAVLDAGPDDTVLVAGRGHETIQEVAGVDLELDDRVEARRALATRHERTTTA

NT seq 1602 nt +upstreamnt +downstreamnt
gtgacatccccgctcgaccgcttccggcccacggccacgcgcccgcgccgggtgcgggac
ctcgccctgaccttcgggctcgagaccgcagcgaccggcccggacgacgtgaccgtcacc
tcggtcgtctccgacaaccggctcacggccgacggcgacctgttcgtcgcgctcgcgggc
tcgcgcgcgcacggcgcccggttcgcggccgacgccgtcgcgcgcggcgcccgggccgtc
ctcaccgacgccgagggcgcgcgcctgctcggcgacgcgctcgcgggcgtgcccgtgctc
gtcgcgcccgacccgcgcgccgtgctcggcgccgtcgcggcgtgggtctacggcagcccg
gccgagcgcctcatgacgttcggcgtcacgggcaccaacggcaagacgaccaccacctac
cagatcgaccacctgctgcgcgcgctcgggtggaagggcgggctcgtcggcacggtcgag
atgcgctcgggcgaccgcgtgctcgcgagccgcctgacgacgcccgaggcggccgacctg
caggccctgctcgccacgatggtcgaggacgaggtccgcacgctcgcgatggaggtgtcc
tcgcacgcgctcgcgctgcaccgcgtcgacggcatcgagttcggcgtcgtcggcttcacc
aacctcagccaggaccacctcgacttccacggcgacctgcaggcgtacttcgacaccaag
gccctgctgttcacgcccgcccgcgcgcgccgcggcgtcgtcgtggtcgacgacgcgtgg
ggcgagcgcatggccgacgccgcgcgcatcccggtcgcgacgctccgcacccggccggcg
cgcgacggcgaggcggacgccgactggaccgtgtccgacgtcgtcccgcacggcacgggc
tcggccttcacgctcacgcacgccgacggccggacgctgcgcacctcgacgagcctgccg
ggcgggttcaacgtggccaacgcggcgctcgccgccgtcatggtgctcgagggcggcgcg
cacctcgacgacgtccgcgaggcgctcgacgccgcgggcgggctctcggcgacggtcccc
ggccgcatggaggtcgtcggggcgggcggcggtggcgacccgcgcgtcgtcgtggacttc
gcgcacaacaccgacgcgctcgagctcgcgctcgacgccctgcgcccgacgacggccgga
cggctcgtcgtcgtgttcggcgcgacgggcgaccgcgacgcgggcaagcgcccggccatg
ggcgcggccgcggtgtcgggggccgacgtcgtcgtggtgaccgacgacgacccgcacggc
gaggacccggccgcgatccgcgccgaggtcctgggcggcgcgcgcgccgcgcgcgacgtc
gccgccgcggcggggcgctccgtggaggtgctcgaggtcgcgccgcgcgccgaggcgatc
cgccgcgccgtgctcgacgccggacccgacgacaccgtgctcgtcgccggccgcggccac
gagacgatccaggaggtcgcgggcgtcgacctcgagctcgacgaccgcgtcgaggcccgt
cgcgccctggccacgaggcacgagaggaccaccaccgcatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-IVA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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