KEGG   Isoptericola variabilis: Isova_2086Help
Entry
Isova_2086        CDS       T01520                                 

Definition
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
iva  Isoptericola variabilis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:iva00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Isova_2086
Enzymes [BR:iva01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Isova_2086
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Isova_2086
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(2248656..2249573)
Genome map
AA seq 305 aa AA seqDB search
MPELPEVETVRDGLARLAVGAVVRDVEVFREYSVRRHDGGPAGFADQLRGRRLAEAARRG
KFLWLPLEGHDAALLAHLGMSGQLLVRDPAVVGTWEHPHLRVRLHLEGAPSGARYLDFVD
QRTFGHLAVVDLVPTPDGAPGGLGTQRPAVPEPVAHIGRDLLDPGIDRDVVVDAIRRRRT
GIKRALLDQTVTSGVGNIYADEALWRARLHYARPTDTLRRAEVHRVLDAAAQVMTEALAQ
GGTSFDALYVNVNGESGYFSRALAVYGRAGEPCPRCGTPVRRDSFMNRSSYTCPRCQPRP
RNARW
NT seq 918 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagctgcccgaggtcgagaccgtccgtgacggtctcgcccgcctcgccgtgggt
gcggtggtccgcgacgtcgaggtcttccgcgagtactccgtgcggcggcacgacggcgga
ccggccggcttcgcggaccagctgcgcgggcggcgcctcgccgaggcggcgcggcgcggc
aagttcctgtggctcccgctcgaggggcacgacgccgcgctgctcgcccacctcggcatg
tcgggccagctgctcgtgcgcgaccccgcggtcgtcggcacgtgggagcacccgcacctg
cgcgtgcggctgcacctcgagggcgcgccgtccggggcccggtacctcgacttcgtcgac
cagcggacgttcggccacctggcggtggtcgacctcgtgcccacgcccgacggcgcgccc
ggcggcctgggtacgcagcggcccgcggtgcccgaaccggtcgcgcacatcggccgcgac
ctgctcgaccccggaatcgaccgcgacgtcgtcgtcgacgcgatccgccgccgtcggacc
ggcatcaagcgcgcgctgctcgaccagacggtcacgtccggcgtcggcaacatctacgcc
gacgaggcgctgtggcgtgcacgcctgcactacgcccgcccgaccgacacgctgcggcgc
gcggaggtgcaccgggtgctcgacgccgccgcgcaggtcatgaccgaggcgctcgcgcag
ggcggcacgagcttcgacgcgctctacgtcaacgtcaacggcgagtccggctacttctcg
cgcgcgctcgcggtgtacgggcgggcgggcgagccgtgcccgcgctgcggcacgcccgtg
cggagggactcgttcatgaaccgctcgtcgtacacgtgcccgcggtgccagccgcgcccg
cgcaacgcgcgctggtag

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