KEGG   Isoptericola variabilis: Isova_2914
Entry
Isova_2914        CDS       T01520                                 
Name
(GenBank) Deoxyribonuclease IV (phage-T(4)-induced)
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
iva  Isoptericola variabilis
Pathway
iva03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:iva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Isova_2914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:iva03400]
    Isova_2914
Enzymes [BR:iva01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     Isova_2914
DNA repair and recombination proteins [BR:iva03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Isova_2914
SSDB
Motif
Pfam: AP_endonuc_2 Dus
Other DBs
NCBI-ProteinID: AEG45599
UniProt: F6FW55
Position
3199047..3199835
AA seq 262 aa
MSVKIGAHVDLSDAVAQAKEIGADVVQVFVSDPQAWKVPPIEHPGGTEAFREEAAAAGLD
VYVHAPYVINVASTNNRIRIPSRKLLQQVMVRAEEIGAKGVIVHGGHVTAKDDPAAGFDN
WRKAIDALESDVPVLIENTAGGDFSMARRLERIEQLWAAVMQANGAENVGFTLDTCHAWA
GGIDLATAVDEIRGITGRIDLVHANDSRDAAGSGADRHTHFGLGMIPEELLVGVIATAGA
PVICETHGDMGPDIAWLRERLA
NT seq 789 nt   +upstreamnt  +downstreamnt
atgagcgtgaagatcggtgcccacgtcgacctgtccgacgccgtcgcgcaggccaaggag
atcggcgcggacgtcgtccaggtgttcgtgtcggacccgcaggcgtggaaggtgccgccg
atcgagcaccccggaggcacggaggcgttccgcgaggaggcggccgccgccgggctcgac
gtgtacgtccacgcgccctacgtcatcaacgtcgcgtcgacgaacaaccggatccgcatc
ccgagccgcaagctgctgcagcaggtcatggtccgcgcggaggagatcggggccaagggc
gtcatcgtccacggcgggcacgtgaccgcgaaggacgacccggcggccggcttcgacaac
tggcgcaaggcgatcgacgccctcgagagcgatgtgcccgtgctcatcgagaacaccgcg
ggcggcgacttctcgatggcccgccggctcgagcgcatcgagcagctgtgggccgcggtg
atgcaggcgaacggcgccgagaacgtcggcttcacgctcgacacgtgccacgcctgggcg
ggcggcatcgacctcgcgacggcggtcgacgagatccgcggcatcacgggccgcatcgac
ctcgtccacgccaacgactcgcgcgacgccgccggctcgggcgcggaccggcacacgcac
ttcggcctcggcatgatccccgaggagctgctcgtcggcgtgatcgccacggcaggcgcc
ccggtcatctgcgagacgcacggcgacatgggccccgacatcgcctggctgcgcgagcgg
ctggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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