KEGG   Janthinobacterium agaricidamnosum: GJA_5380
Entry
GJA_5380          CDS       T03157                                 
Symbol
clpV
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
jag  Janthinobacterium agaricidamnosum
Pathway
jag03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:jag00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GJA_5380 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:jag02044]
    GJA_5380 (clpV)
Secretion system [BR:jag02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   GJA_5380 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_22 AAA_5 ClpB_D2-small AAA_16 Zeta_toxin AAA_7 TniB Sigma54_activat AAA_25 AAA_14 nSTAND3 ATPase_2 Clp_N AAA_18 NACHT T2SSE Hpr_kinase_C DUF815 CbiA
Other DBs
NCBI-ProteinID: CDG85976
UniProt: W0VDJ4
Position
complement(5780762..5783389)
AA seq 875 aa
MADISRIALFGKLDRLCYQAIESSTVFCKLRGNPYVELVHWLHQLLQLQDSDLMRIVNHF
GVDPAALAHDLTAALDRLPRGAGSVSDLSSQVEEAVERGWVYATLMFGASEVRSGHLLLG
VLKTATLRNTLFAISRQFERVKPDLLAEDFGKLLEGSPEAAPGASAAAETAPAGGAPSRQ
EALQRYTVDLTEQARSGKLDTIVGRDEEIRQLIDILMRRRQNNPILTGEAGVGKTAVVEG
FAHRIVAGDVPPALRSVVLRTLDIGLLQAGASVKGEFENRLRQVIEEVQASEKPVILFID
EAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQV
AEPDEAKALRMMRGMTVTMENHHRVQVLDEALEAAVRLSQRYIPARQLPDKAVSLLDTAC
ARVAVSQHATPAAVDDARQRIAALDTELDIIEREAAVGVNTQAREAAALDALALEKERLD
TLEARWFAEQKLVARILKLRTSLRQDGADWDALQELKALQNGLAELQGETPLILASVDAQ
AVAAVVQDWTGIPVGRMVRNELDNVLRLADTLGQRIIGQRHALDTIARRIQTSRAGLDNP
SRPVGVFMLAGTSGVGKTETALALAESLYGGEQNIITINMSEYQEAHSVSTLKGAPPGYV
GYGEGGVLTEAVRRRPYSVVLLDEVEKAHPDVHELFFQVFDKGWMEDGEGRVIDFKNTLI
LLTTNAGTDTIGALCRDPARIPEPDSMAAALRAPLLQVFPPALLGRVVVVPYYPLSDSML
ASIIELQLKRIARRMEQAHKAPFTWSDAVVGLIGSRCTELESGGRMIDAILTNTVLPAIS
GEFLRRMVAGQTIASVHVDVADSEFVYDFASAAGE
NT seq 2628 nt   +upstreamnt  +downstreamnt
atggctgacattagccgcatcgccttgttcggcaaactcgaccgcctgtgctaccaggcc
atcgaaagcagcaccgtcttttgcaaattacgcggcaatccgtatgtcgaactggtgcac
tggctgcaccagctgctgcaattgcaggacagcgacctgatgcgcatcgtgaaccatttc
ggcgtcgatccggcggcgctggcgcatgacctgacggcggcgctggaccgcctgccgcgc
ggcgccggctcggtcagcgacctgtcgtcgcaagtcgaggaagccgtcgagcggggctgg
gtctacgccacgctgatgttcggcgcatccgaagtgcgcagcggccatttgctgctgggt
gtgctgaaaaccgcgacgctgcgcaacacgctgttcgcgatatcgcgccagttcgagcgg
gtcaagccggacttgctggcggaagacttcggcaagctgctggaaggttcgccggaagcc
gcacctggcgccagcgccgcggctgaaactgcgccggccggcggcgcgccgtcgcgccag
gaagcgctgcagcgttataccgtcgacctgaccgaacaggcgcgcagcggcaagctcgat
actatcgtcggccgcgacgaggaaatccgccagctgatcgacatcctgatgcggcgccgc
cagaacaacccgatcctgaccggcgaggccggcgtcggcaagaccgccgtggtggaaggc
tttgcgcaccgcatcgtcgccggcgacgtaccgccggccttgcgcagcgtggtcttgcgc
acgctcgacatcggcctgctgcaggccggcgccagcgtcaagggcgaattcgaaaaccgc
ttgcgccaggtgatcgaagaagtgcaggcctcggaaaaaccggtgatcctgttcatcgac
gaggcgcacacgctggtcggcgccggcggcgcggccggcaccggcgacgccgccaacctg
ctgaaaccggcgctggcgcgcggcacgctgcgcaccgtcgccgccaccacctgggccgaa
tacaagaagcacatcgaaaaagaccctgccctgacgcgccgctttcaggtggtgcaagtg
gccgaaccggacgaagcgaaggcgctgcgcatgatgcgcggcatgaccgtcacgatggaa
aaccaccaccgggtgcaggtgctggacgaggcgctggaagcggcggtgcgcctgtcgcag
cgctacatcccggcgcgccagttgccggacaaggcggtcagcctgctcgacaccgcctgc
gcccgcgtcgcggtcagccagcatgcgacgccggccgcggtggacgacgcgcgccagcgc
atcgccgcgctggacaccgaactcgacatcatcgagcgcgaagcggcggtcggggtcaat
acgcaggcgcgcgaagcggcggcgctggatgcgctggcgctggaaaaagagcgcctcgac
acgctggaagcgcgctggttcgccgaacagaaactggtggcgcggatactgaaattgcgc
accagcctgcggcaggacggcgccgactgggacgcgctgcaggaattgaaggcgctgcaa
aacggactggccgaactgcagggcgaaaccccgctgatactggccagcgtcgacgcccag
gcggtggcggcggtggtgcaggactggaccggcatcccggtcggccgcatggtcaggaat
gaactcgacaatgtgctgcgcctggccgacacgctgggccagcgcatcatcggccagcgc
cacgcgctcgacaccatcgcgcggcgcatccagacctcgcgcgccggactcgacaatcca
tcgcggccggtcggcgtgttcatgctggccggcacctcgggcgtcggcaagaccgagacc
gcgctggcgctggccgaaagcctgtacggcggcgagcagaacatcatcaccatcaacatg
agcgaataccaggaagcgcacagcgtctcgacgttgaagggcgcgccgccgggttatgtc
ggttatggcgaaggcggcgtgctgaccgaggcggtacggcgccgtccgtacagcgtggtg
ctgctggacgaggtcgaaaaagcccacccggacgtgcacgaactgtttttccaggtgttc
gacaagggctggatggaagacggcgaagggcgcgtgatcgacttcaagaacacgctgatc
ctgctgaccaccaacgccggcaccgacaccatcggcgcgctgtgccgcgatccggcgcgg
attcccgagccggacagcatggccgccgccttgcgcgcgccgctgctgcaagtgttcccg
ccggcgctgctgggccgggtggtggtggtgccgtactacccgctcagcgacagcatgctg
gcgtccatcatcgaactgcaattgaaacgcatcgcgcgccgcatggagcaggcgcacaag
gcgccgttcacgtggagcgacgcggtggtcggcctgatcggcagccgctgcaccgagctg
gaaagcggcggccgcatgatcgacgcaatcctgaccaacaccgtgctgccggccatcagc
ggcgaattcctgcgccgcatggtggccggccagaccatcgccagcgtgcatgtggacgtc
gccgacagcgagttcgtgtacgacttcgccagcgccgccggggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (39)   

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