KEGG   Janthinobacterium agaricidamnosum: GJA_594
Entry
GJA_594           CDS       T03157                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
jag  Janthinobacterium agaricidamnosum
Pathway
jag03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jag00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GJA_594 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jag03021]
    GJA_594 (rho)
   03019 Messenger RNA biogenesis [BR:jag03019]
    GJA_594 (rho)
Transcription machinery [BR:jag03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     GJA_594 (rho)
Messenger RNA biogenesis [BR:jag03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GJA_594 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 NACHT
Other DBs
NCBI-ProteinID: CDG81253
UniProt: W0V1N8
Position
complement(684491..685753)
AA seq 420 aa
MHLSELKALHVSALLEMAIGLDIDNAARLRKQELMFAILKKRAKSGEQIFGDGALEVLPD
GFGFLRSPDASYMASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GESPEMSKHRILFENLTPLHPNEPLRLEREMNGQENITGRIIDLIAPIGKGQRGLLVASP
KSGKSVILQHIAHAITANHPDITLIVLLIDERPEEVTEMQRSVRGEVVASTFDEPATRHV
QVAEMVLEKAKRLVEMKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALIETGSRMDDVIFEEFKGTGNMEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPDQLQKIWILRKLLYSMDEIEAMEFILDKMKATKNNAEFFDMMRRGG
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcatttatctgaattaaaggccctacacgtatccgccctgctggagatggcgatcggt
cttgatatcgacaacgcggcccgtttgcgcaagcaggaactgatgtttgcgatcctgaag
aaacgcgcgaaatcaggcgaacagatttttggcgacggcgccctggaagtgctgcccgac
ggcttcggcttcctgcgctcgcccgacgccagctacatggcgtccaccgacgatatttat
atttccccttcgcaaatccgccgtttcaacctgcacaccggcgattcgatcgaaggcgaa
gtccgcaccccgaaagatggcgaacgttatttcgccctggtgaaagtcgacaaggtcaac
ggcgaatcgccggaaatgtcgaaacaccgcatcctgtttgaaaacctgacgccgctgcac
ccgaacgagccgctgcgcctggaacgtgaaatgaatggccaggaaaacatcaccggccgc
atcatcgacctgatcgccccgatcggcaaaggccagcgcggcttgctggtggcgtcgccg
aaatccggtaaatccgtgattttgcagcacatcgcccacgccatcaccgcgaatcacccg
gacatcacgctgatcgtgctgctgatcgacgaacgcccggaagaagtaaccgagatgcaa
cgctcggtacgcggcgaagtggtcgcctcgaccttcgacgaaccggccacccgccacgtg
caggtggctgaaatggtgctggaaaaagccaagcgcctggtcgaaatgaaaaaagacgtg
gtcatcctgctcgattcgatcacccgcctggcgcgcgcctacaacaccgtgatcccggcc
tccggcaaggtactgaccggcggtgtcgacgcgaatgcgctgcaacgtccgaaacgtttc
ttcggcgcagcccgtaacatcgaagaaggcggctcgctgaccatcatcgccaccgcgctg
atcgaaaccggttcgcgcatggatgacgtgatctttgaagaattcaaaggtaccggcaac
atggaagtccatctggaacgccgcctggccgagaaacgcgtctatcctgcgatcaacctg
aacaaatccggcacgcgccgcgaagagttgctgatcaagccagaccagctgcaaaaaatc
tggatcctgcgcaagttgctgtactcgatggacgagatcgaggcgatggagttcattctc
gacaagatgaaagcgaccaagaacaacgccgagttcttcgacatgatgcgccgcggcgga
taa

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