KEGG   Jannaschia sp. CCS1: Jann_0421
Entry
Jann_0421         CDS       T00330                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
jan  Jannaschia sp. CCS1
Pathway
jan03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:jan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Jann_0421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jan03400]
    Jann_0421
Enzymes [BR:jan01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Jann_0421
DNA repair and recombination proteins [BR:jan03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Jann_0421
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ABD53338
UniProt: Q28VC4
Position
424521..425309
AA seq 262 aa
MPFTLATWNINSVRLRQPIVSQLMTEEAPDILCLQECKSPVDKMPSDVFAALGYTHVVAR
GQKGYNGVAIYSKLPMEEAGSHEFAGLDHARHIAGRLENGVTIHNFYVPAGGDVPDRDVN
IKFGQKLDYLTDMRDWAKTDTPQKSILLGDLNIAPREDDVWSHKQLLKVVSHTPIEVEHL
AEAQDAGGWVDVTRKDIPDGPLFSWWSYRSPDWDNADKGRRLDHVWATPDISNAAHSSRI
ARHVRGWEKPSDHAPVFATFDL
NT seq 789 nt   +upstreamnt  +downstreamnt
atgcccttcactctcgccacctggaacatcaactccgtccgtctgcgccaaccgatcgtg
tcgcaactcatgaccgaggaggcgcccgacattctgtgccttcaggaatgcaaaagcccc
gtcgacaagatgccgtccgatgtctttgcagcgcttggctacacccatgtcgtggcgcgt
gggcagaagggctacaacggtgtggcgatctactccaaactcccgatggaggaggccgga
tcccatgaattcgcaggcctcgaccatgcgcgccacatcgccgggcggctggaaaacggc
gtcaccatccacaacttctatgtgcccgcgggcggcgacgtgccggaccgcgacgtgaac
atcaagttcggccagaagctcgactacctcaccgatatgcgagattgggcgaagacggac
acaccgcagaaatccatcctcttgggcgacctgaacatcgcaccccgggaagatgacgtc
tggtcccacaaacaattgctgaaagttgtatcccatacgcccatcgaggtggagcatttg
gccgaggcgcaggacgccgggggatgggtcgacgtcacccgcaaggatatccccgacggg
ccgctattctcgtggtggtcctaccgctcgccggattgggacaatgccgacaaggggcgt
cgtctcgatcatgtgtgggccacgcccgatatctccaatgctgcgcattcctcccgcatt
gcccgccatgtgcgcgggtgggaaaagccgtccgatcacgccccggtttttgcgactttc
gacctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system