KEGG   Jatropha curcas (Barbados nut): 105640826
Entry
105640826         CDS       T03922                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105640826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105640826
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     105640826
SSDB
Motif
Pfam: Rcd1 Rhabdo_ncap
Other DBs
NCBI-GeneID: 105640826
NCBI-ProteinID: XP_037496711
Position
Unknown
AA seq 273 aa
MLQNRAVRGDLAPLLWHSFGTITTLLQEIISVYHLLSSPYLTDKASNKVCNALVLLQGIA
AHPDTKMLFIKAKIPLYLTAFLNNTNKEKSHEFLRLSSLGVIGALVKVDDAQVVRFLLSS
EILPSVLRCMEVGNELSKTVATFIVYRILLNDEGLKYCSVLADRFFAIGHVLAKMIEKLA
EDGRIAEDQSKRLLKHIIWCYHRLSESPRACDGLRCCLPMKLRDSSFINVIRDDQTAMHC
LGQLFHNVAAGHPSTTQKALQPVSPLLGHLIGG
NT seq 822 nt   +upstreamnt  +downstreamnt
atgctccagaatagggcagttcgtggagatctggcaccattattatggcattcttttggt
actatcactacactgctacaggaaataatttcagtgtaccacttactgtcttctccatac
cttacagacaaagcatcaaataaagtgtgcaatgcacttgttttacttcaggggatagca
gcacacccagacacaaagatgctttttattaaggctaaaatacctttgtatctcactgcc
tttcttaacaacacaaacaaggaaaagtctcatgagtttttaagacttagcagtttagga
gttattggtgcacttgtgaaggttgatgacgcgcaagttgtacgcttccttctcagttct
gaaattcttccttctgtcctacgttgcatggaggttggcaatgaattgtcaaaaacggta
gctacatttatagtctacagaatcctactaaacgatgagggactgaagtattgttccgtt
ctagcagaccgattttttgccatagggcatgttttagcaaaaatgattgagaagctcgcc
gaggatggaaggattgcagaagaccaatctaagcgactgctgaaacacattatttggtgt
tatcataggctatcagaaagtccaagggcatgcgatgggctaaggtgttgccttccgatg
aagttgagagattcatccttcattaatgtaatccgcgatgatcaaacagcaatgcattgc
ttaggtcagttatttcacaatgttgcggctggacatccgtctacaactcaaaaggctttg
cagccggtaagtccattactcggacacttaattggaggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system