KEGG   Jonesia denitrificans: Jden_1665Help
Entry
Jden_1665         CDS       T00972                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
jde  Jonesia denitrificans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:jde00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Jden_1665
Enzymes [BR:jde01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Jden_1665
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Jden_1665
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1799697..1800626)
Genome map
AA seq 309 aa AA seqDB search
MPELPEVETVRDGLARHVLGHQVTGVEVFREYSVRRHEGGPHDFSARLSGRVMRGWARRG
KFLWCEFDEPGEVLVAHLGMSGQLLIKEAQDAEPRHPHVRVRLWTHTADGREGVVDFVDQ
RTFGYLALSPTVATADARPGGRGSERAVVPSLAEHIARDLLDPVLAVGSVQWEALLDRCV
GSKVAVKRLLLDQSVMSGVGNIYADEGLWRARIHGESAANAVTRTAWRRLLTHLGEVMGE
ALVQGGTSFDDLYVNVNGQSGYFDRSLNVYGREGEPCRRCATPIRRSAFMNRSSFWCPRC
QRKRSLRTG
NT seq 930 nt NT seq  +upstreamnt  +downstreamnt
gtgccggagttacctgaggtggaaactgtgcgtgatgggttagctcgtcatgtgctgggt
caccaggtcactggtgttgaggtgttccgtgagtattcggtgcgccgccatgagggtggt
ccccacgattttagtgcgcggctttctggccgggtgatgcgcgggtgggcgcgtcgtggg
aagttcttgtggtgtgagtttgatgagcctggtgaggtgttggtcgcccatttggggatg
agcgggcaattgctcattaaggaagctcaggacgcggaaccgcgccacccgcatgtgcgg
gtgcgtttgtggacgcacacagcggacggtagagaaggcgtcgttgattttgtggaccag
cgcacgttcgggtatttagcgttgtcacctactgttgctactgccgatgcgcgtcctggt
gggcggggtagcgaacgtgctgttgtcccttcgttggcggagcatatcgcccgtgatctt
cttgacccggtgttggcggtggggtctgtgcagtgggaggctctccttgaccggtgtgtg
gggtcgaaggttgcggtgaaacggcttctgcttgaccagtctgtgatgtctggtgtgggc
aacatttacgctgatgaggggttgtggcgggcgcgtattcatggagagagcgccgcgaac
gcggtgacccgcaccgcgtggcggcgtcttcttactcacctgggtgaggtgatgggtgaa
gcgttggtgcagggcggcaccagctttgatgacttgtatgtcaacgttaacggacagtcg
gggtattttgaccggtcgttgaacgtgtatgggcgtgagggtgagccatgcaggcggtgt
gctacccctatccgccgctcagcgttcatgaaccggtcttcattctggtgtccgcggtgc
caacggaaacggtcactgcgtacggggtaa

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