KEGG   Jeotgalibaca sp. PTS2502: BW721_04625
Entry
BW721_04625       CDS       T04689                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
jep  Jeotgalibaca sp. PTS2502
Pathway
jep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:jep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BW721_04625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jep03400]
    BW721_04625
Enzymes [BR:jep01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BW721_04625
DNA repair and recombination proteins [BR:jep03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BW721_04625
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_4 SH3_13 UvrD_C_2 Viral_helicase1 AAA_11 HHH_5 AAA_22 UvrD-helicase SLFN-g3_helicase AAA_12 T2SSE nSTAND3 AAA_29 AAA_28 AAA DUF2766 AAA_18 AAA_16 UvrD_C
Other DBs
NCBI-ProteinID: APZ49024
UniProt: A0A1U7EBB7
Position
complement(950840..953272)
AA seq 810 aa
MENNEQPYLLGELKAVFFENPSNFYKVLLIELHENNFPIDKDEIVVTGNFGDISLDTVYR
FTGTAVTHPKYGIQFQAISYEREKPTGKNGMIAFLSSDRFPGIGNRTAEKIVDTLGEQAI
DAILDHPDCLKQVSGLNEKKRQMIYDVLQQVQGTEKTIIELANLGFTNHQAAAIMQVYKT
ETLQIVRENPYQLIQDIDGIGFKRADQLAMELDIEADDKNRIKGAIISTVQDLCLSNGDT
YVESNDLFERSLQLLETSRRFVIEDQLLIESVVEMVENMELVEDQKRFALPSLFFAEEGI
ASSLYRFLKKGKSIDYPGVDFKKEISKMEDKLNIQYDDIQADAIEQALTRPFFILTGGPG
TGKTTVLNGIVNLFCELNDLPVNSMEYLNGIYPIIMAAPTGRAAKRMNEMTGIPSSTIHR
LLGLTGQENPNDDVYTQELEGKLLIIDESSMVDTWLMNRLLKSIPAGMQVIFVGDKDQLP
SVGPGQVLFDLLSSQVIPQVELRRIYRQAGGSSIIPLAHEIKEGRLAPDFTRNHSDRSFF
ACQANQIEPLIRTVVEKAKAKGYTAKDIQILAPMYKGPAGINALNVMMQDILNPNPDKRR
REAQYFDALYRVGDKILQLVNQPELNIFNGDIGEIVSIQYAKETEDKVDEITVVFDSVEV
TYKKNDWNKFTLAYCCSIHKAQGSEFSMVILPMVRQYGRMLKRNLLYTAVTRSKSKLILC
GEVEAFEYAIKNTGDLRKTMLIEKVVRHQNSDKFIIEAEPIKQETISQVVEEFETTVTEP
DYQLTIEKIQKGNIDPMIGMADISPYDFIH
NT seq 2433 nt   +upstreamnt  +downstreamnt
atggaaaacaatgagcagccttatttattaggagaattaaaagctgtcttttttgaaaat
ccatcgaacttttataaagttctcttaatcgaacttcatgaaaataatttccctattgat
aaggacgaaattgttgtcactggtaattttggtgacattagcttggataccgtttatcgt
tttacaggtacagctgtcactcatccaaagtatggtattcaatttcaagccatcagttac
gaaagagagaaaccgactgggaaaaatgggatgattgccttcctatctagtgaccgtttc
cctggaataggtaatcgaacagctgagaaaatcgttgatacgcttggggaacaagccata
gatgctattttagatcatccagattgtttgaagcaggtttcaggtttaaatgagaaaaaa
agacagatgatttacgatgtcctccaacaagttcaagggactgaaaagacgattattgaa
cttgctaatttaggctttacgaatcatcaagctgcggctattatgcaagtttataaaaca
gaaacactgcaaatcgtgagagaaaatccttatcagttaatccaagatatcgatggtatt
ggctttaaacgagccgatcaactcgctatggagcttgatattgaagcagacgataagaac
cgaattaaaggggctattatttcaaccgttcaagatctatgtttgtccaatggtgatact
tatgttgaaagtaatgacttatttgaacgatcgttacaactgcttgaaacaagccgccgt
ttcgttatcgaggatcaactcttgattgaaagtgtcgttgaaatggtcgagaatatggaa
cttgtcgaggatcaaaaacgctttgcattaccctctttattttttgcagaagagggaatt
gcatctagtctgtaccgctttttgaagaagggtaaaagtattgactatccaggtgtcgat
ttcaaaaaagaaattagtaaaatggaagataaactgaacattcaatatgacgatattcaa
gctgatgcgattgagcaagccttaacgcggcctttttttatcttaacgggtggccctggt
acggggaaaacgacggtattaaatgggattgttaatctgttttgtgaattgaatgatctt
cctgttaattcaatggagtacctcaatggtatttatcccattattatggcagcaccaaca
ggtcgggctgctaaacggatgaatgaaatgactggtattccaagtagtaccattcaccgt
ctactaggattaaccggtcaagagaatcccaatgatgacgtctatacacaagagctagag
gggaaactgcttattatagatgagtcatctatggtcgatacatggctgatgaatcgtttg
ttaaaatctattcctgccggtatgcaagttatttttgtaggtgataaagatcaactacca
tcagttggaccaggacaagtcttgtttgatttattgagtagccaagttattcctcaagtc
gaactaagacgtatctatcgccaagcgggtgggtcttcaattattcctttagctcatgaa
attaaagaagggcgacttgctcctgactttactcgtaatcacagtgaccggtcgtttttt
gcttgtcaggcgaatcaaattgaaccactcattcgtactgttgtggaaaaagctaaggcc
aaaggatatactgctaaggacatccaaatactggcacctatgtataaggggccggctggt
attaatgctttgaatgttatgatgcaagatattctaaatccaaatcctgataaacgaaga
agagaagcgcagtatttcgatgccttataccgagtaggcgataaaattcttcagttagtt
aatcagccggaattaaatatttttaatggtgatattggtgaaattgttagcattcaatat
gcgaaggaaacagaagataaagtagatgagataacggttgtttttgatagcgtggaagtc
acctataaaaagaatgattggaacaaatttacattagcctattgttgctccatccataag
gcccaaggtagcgagttttcaatggttattttgcccatggttcgtcaatatggccgtatg
ttaaagcgaaatttactttatacagccgtaactcgtagcaaaagtaagttgattttgtgt
ggtgaagtagaagcatttgaatatgctattaagaacactggtgacttgagaaaaaccatg
ttgattgagaaagttgttcgccatcaaaatagcgataaatttattattgaagctgaaccg
attaagcaagaaacaattagtcaagtcgttgaagagtttgaaaccactgtaactgaacct
gattatcagctaacaattgaaaaaatccaaaagggtaatattgatccaatgattgggatg
gctgatatctcaccatatgactttattcattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (58)   

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