KEGG   Juglans regia (English walnut): 108984270
Entry
108984270         CDS       T05245                                 
Name
(RefSeq) DNA mismatch repair protein MLH3-like isoform X1
  KO
K08739  DNA mismatch repair protein MLH3
Organism
jre  Juglans regia (English walnut)
Pathway
jre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    108984270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jre03400]
    108984270
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     108984270
SSDB
Motif
Pfam: MutL_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 108984270
NCBI-ProteinID: XP_035551563
UniProt: A0A6P9F6Q5
Position
11:398741..408525
AA seq 1212 aa
MRSINPLPGAVRSSMRSGVILFDLPRVVEELVFNSLDAGATKVSVYVGIGTCSVKVVDDG
SGIPRDGLVLLGERYATSKFHQLADMDDASVSFGFRGEALASISDVSVLEIVTKAYGRPN
GYRKVIKGCKCIYLGIDGDRKEVGTTVNVRDLFYNQPVRRKYMQSSPKRVLHSVKKCILM
IALVHSQISFKVIDNESGDELLCTHPSSPLSLLKSEFGVEVPDSLHELNVSDDILKLSGY
ISGPCDGFEIKAFQYVYINSRFICKGPIHKLLNQLAIQFDCLDPWKINSQNQKRSRSQAY
PAYILNLSCPRSLYDLTFEPSKAKVEFKDWTPILTFTEKVIQRFWNDNLTLGIDLSETSE
IEKKKCRVKNHKASLDIYSSPSEMLKEFDHLTEIEHDRIPYANLHKNSAEFREQQNEMGF
VCQNDYAFQSWDGLEAKCIPSATCKYENHLLTSDNNFLSIEGNCLKNRSNDDVGNSLSSA
WGVEFLKVDPVVSNELAGIALSCDLVGRDIEKPFLQVCSSQRRLPLERALFANDDGYEFQ
RDGFRTNWKQRSAYGGDDVLEFEGTKQSFDLLPRTQWQEDASYSQSFTREIKKVDVPADF
DFPSRAFGKSIPSYAEHFIEEDVLEYDSAVKHLGKLASSHSDRCPLASDSLFLANPWGFK
HLRDGNALRESPHSGESTGYGHLVSKGKSDCKSSFDIMPKGSRQEYCTSTCLYNKVDFDD
YACFSRNSCKFFPRVNQEYKFSLEHANILPDDTGWLNLESEAKDYTRVDKYESQRDTMGY
QDSEQDRVPKKRSRRSLSAPPFYRGKRRFFSLNCPSIMKAGKPGAKIFHNALPYPEDDLL
KHAKQPSGAHHLYFKPSSVEHLLSDNSLAFRLDVEKMTSISANLKENEEGDTVEQSCYFG
SQDMAPVFFSKKTQDSMNSWSKWRSFSSQITNKNKSCDTNNESHILDISSGFLHLAGDSL
VPESINKNSLGNAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRKKVFSGEAKT
INYLNIEQELILPEIAYQLLQNYAEQITDWGWICNIHGQDSRSFKRNLNLLHRRPILVTL
LAVPNILGVNLSDVDLLEFLQQLADTDGSSTMPPSVLRVLNMKACRGAIMFGDSLLPSEC
SLIVEELTQTSLCFQCAHGRPTTIPIVNLEALHKQIAKLESLGDNPNKLWHGLHRQELSI
DRAAQRLGSARA
NT seq 3639 nt   +upstreamnt  +downstreamnt
atgaggagcatcaatcccttgccaggggcagttcgtagttcgatgcgctctggcgttatc
ctctttgacctgccaagggttgtggaagagctggtttttaacagtctggatgccggcgcg
acgaaggtatcagtttatgtagggattggcacctgttcagtaaaagtagtggatgatgga
tctggcattcctagggacggattggtgttgttgggagaaagatacgcgacatcaaagttt
caccagttggctgatatggatgatgcaagtgtgagctttggctttcggggagaagcattg
gcttccatttccgatgtttcagtgttggaaattgtaacaaaagcttatgggaggccgaat
ggatatcgtaaagtcataaagggatgcaagtgcatatatcttggaattgatggtgatagg
aaggaggtaggcaccacagttaatgtccgagatttattttacaaccaaccagttcggagg
aaatatatgcaatccagccccaagagggtgttgcactcggtcaagaaatgcatccttatg
attgcccttgtccactcacagatttcctttaaagtcattgataacgaaagtggggacgag
cttctttgcactcatccttcttctcctttgtcactattgaaaagtgagtttggggttgaa
gttcctgactctcttcatgaattgaacgttagtgatgatatattaaagctatctggctat
atatctggcccctgtgatggttttgaaattaaggcctttcaatatgtctatattaactca
cggttcatttgcaaaggtccaattcataaactgctgaatcaattggccattcagtttgac
tgtttggatccatggaaaatcaattcccaaaaccagaaaagaagtaggtctcaagcttat
ccagcttatattttgaatctaagctgccctcgttctctgtatgatttgacctttgaacca
tcaaaggcaaaagttgagttcaaggattggactcctatacttaccttcactgagaaggtc
attcaaagattttggaatgacaatctaactcttggtatagacttgtcagaaacttctgaa
attgaaaaaaagaagtgcagggtaaaaaatcataaagcttctcttgacatttattcttcc
ccttcagagatgctcaaagagttcgaccatttgactgaaatagaacatgatagaattcct
tatgcaaacctgcacaaaaattctgctgagtttagagagcaacaaaatgaaatgggattt
gtttgtcaaaatgattatgctttccaatcatgggatggtcttgaagccaaatgcataccc
tcagcaacctgtaagtatgagaaccatctgttgacatctgataacaattttctatccata
gaaggtaattgcttgaagaatagatccaatgatgatgtggggaacagtttaagctcagca
tggggagttgagttccttaaagttgatccagttgtgagcaatgaattggcagggattgca
ttatcttgtgacttggttggcagggatatcgagaaacctttcctgcaggtttgctcctca
caacgaaggctgccccttgagagggctttgtttgcaaatgatgacggatatgaatttcaa
agggatggcttcaggaccaactggaagcaaagaagtgcttatggcggtgatgatgttctg
gaatttgaaggcactaaacaaagttttgatttacttccaaggacccagtggcaagaagat
gcatcatattctcagtcctttaccagagaaattaaaaaagttgacgtgcctgcagatttt
gattttccatcaagagcttttgggaagtcaatcccatcttatgcagagcatttcattgaa
gaagatgttcttgaatatgattcagccgtcaaacacttggggaaattagcctctagtcat
tctgaccggtgtcccctggcctcagattccttatttctagccaacccttggggttttaag
catttaagggatggaaatgcactcagggagagtcctcactctggtgaaagtactggttat
gggcatcttgtgtctaagggaaagagcgactgcaaatctagttttgatatcatgccaaag
ggctctagacaggaatattgcacctccacttgtctgtataacaaagtagattttgatgat
tatgcttgttttagtagaaattcctgcaaattctttcctagagttaatcaagagtataaa
ttttctcttgaacatgcaaatatattgccagatgatacaggctggttgaatctggaatca
gaagctaaagattacacacgtgttgataaatatgaaagccaaagagatacaatgggatat
caagattctgaacaggatcgtgttcctaaaaaaaggtcaagaagaagcctttcagctcca
ccattttacagagggaaaaggaggttcttttccttaaattgtccttcaattatgaaagcg
ggaaaacccggagcaaaaatctttcacaatgctcttccttatccagaagatgatctgctg
aaacatgccaaacaaccttctggtgctcatcatttatatttcaagccaagttctgtggag
catttgttgtcagacaatagtcttgctttcagactggatgtggagaagatgacaagcatt
tcagcaaacttgaaggagaatgaagaaggtgacactgttgaacagtcctgttattttggc
agtcaagacatggctccagtcttcttctcaaagaaaactcaagattccatgaattcttgg
tctaaatggcggagtttctcttcccagataacaaacaaaaataaatcgtgtgataccaac
aatgaaagtcatatacttgacatctcttccggattcttgcatcttgctggtgattcttta
gttcctgaatctatcaacaagaactccctaggtaatgccaaagttcttcagcaggtggat
aagaaattcattccagttgtggctggtggaacacttgctgttattgaccagcatgctgca
gatgaaaggatccgactggaagaactacgcaagaaggtgttttctggagaagcaaagaca
attaattatcttaacattgagcaagagttgatcctgccagaaatagcctatcagttgctg
caaaattatgctgaacagataacagattggggttggatttgcaacattcatggtcaagat
tcaaggtctttcaagaggaatttgaatcttctccacaggcgtccaatacttgtcactctt
cttgcggtaccgaacattttaggtgtcaatttgtctgatgtagatcttttggaatttctt
cagcagcttgctgatacggatggatcatcaacaatgccaccatcagtcctccgcgtcctt
aatatgaaagcatgcagaggtgcaattatgtttggggactctttgttaccttcggaatgc
tccctcattgtggaagagctaacacagacctcgctttgtttccagtgtgctcatggacga
ccaacaactatccccattgtcaacttggaggccttgcacaagcagattgctaagctcgaa
tctttgggtgataacccaaacaagttgtggcacggtttacatcgacaagaacttagtatt
gatcgtgcggcacagcggttaggttctgcaagagcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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