KEGG   Juglans regia (English walnut): 108988147
Entry
108988147         CDS       T05245                                 
Name
(RefSeq) sister chromatid cohesion protein SCC2
  KO
K06672  cohesin loading factor subunit SCC2
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:jre03036]
    108988147
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    108988147
SSDB
Motif
Pfam: Nipped-B_C Cohesin_HEAT PDS5 PHD PHD_2 zf-RING_16
Other DBs
NCBI-GeneID: 108988147
NCBI-ProteinID: XP_018816828
UniProt: A0A2I4EBQ3
Position
1:7833814..7851631
AA seq 1817 aa
MSNPIVPGSLVSASGSGSGWGHRGIGLSNTIHSEVAPCLPLPSLPVFCGASNQDLRLFDE
PGRGSFSSLDRSEVLAQSSRIADLLRQTDVSYLNLKKDARVVSYGYAEPLELHDQVLQCH
PEAFECSTAGPIKEQISSGTVSEKKPFEQSVPVTVQAQRGNSAAHNYHTDYVVTNHVSTS
SSRKPKLKKKGGDDFSSSVGPDHAEIQDATIGSFCELLEDFCGRAEIPSDDRDEAEWLSV
PLSDLRMLVTEIMSIRAKKLLHLVPVDVLVRLLKVLDHQIHRAEGLSIDECEHSDSDIVL
SIFCALESIHAALAVMGYNEMQKQLYKEEIIERILEFSRHQIMDVMCAYDPSYRALHKPS
ENGEFEGDEDEEPGPEFGSASKKRRSVKTVRVKKSSLNKVSAAMNTILQKMCTILSLLKD
LLLIERLSDSCILQLVKTSFTTFLVDNIQLLQLKAIGLISGIFYSYTQHRTYVIDEILQL
LWKLPSSKRALRSYHLPDEEQRQIQMITALLIQLVHCSANLPEALRQATSGNPILEVSID
SSYPTKCQESATEACCLFWTRVLQRFASLKTQDASEMKAMMENLVMDLLTTLNLPEYPAS
APILEVLCVLLLQNAGLKSKDISARTMAIDLLGTIAARLKRDSVLCRMDKFWILQELDSA
SDVDRSYPKGSCSICLDGRVEKLFFTCQSCQRLFHADCMGVREHEVPNRSWQCQICICRK
QLLVLQSYCKSQCKDGGKKTHNLSEKNPEASETIAKVEIVQQLLLNYLQDVGSDDVHLFV
RWFYLCLWYKDDPKSQQKLIYYLARLKSKAIIRDSGTTSLLTRDSVKKITLALGQNNSFS
RGFDKILHMLLASLRENSPVIRAKALRAVSIIVEADPEVLCDRRVQLAVEGRFCDSAISV
REAALELVGRHIASHPDVGLQYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNGNFSGFTS
ACIEIISRVSDDESSIQDLVCKTFYEFWFEEPSGSERLVFGDGSSVPLEVAKRTEQIVEM
LRRMPNHQLLVTVIKRNLALDFFPQSAKAAGINPVSLTSVRKRCELMCKCLLEKILQVEE
MNSEEVEVRALPYVLVLHAFCVVDPKLCAPASDLSQFVVTLQPYLKTQVDNRMVAQLLES
VIFIIDSVLPLLRKLPQTVVEELEQDLKHMIVRHSFLTVVHACIKCLCSLGKVAGKAASV
IEYLIQVFFKRLDTQPADNKQQVGRSLFCLGLLIRYGKSLLSDSSSRSIDVVSSLSLFKK
YLRMEDFIVKVRSLQALGFVLIAWPEYMLENDIGKILEATLSSGCDVRIKMQALQNLYEY
LLDAESQMGTDKASNNTIHCSVEGGHSVPVAAGAGDTNICGGIVQLYWDNILGRCLDFNE
PVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPQEVNSKLAHHLLMNMNEKYPAFFES
RLGDGLQKSFIFIQLISGIHENVNQKVQYKVPGNVKGKPDGGSFSQARLGVSRIYKLIRG
NRVSRNKFMSSIVRKFDNPSWNDSVVHFLMYCAEILALLPFTTPDEPLYLIYAINRVIQV
RAGALEANMKGLSMYLSQRYLEKIPYENGQQEPAVKPDFNEVASMDLNGTIQHEPAVQPI
FNHTVDLNESIRQETTDQPVPIHSISLEAKIHSMGSDVSIVLSADDLRKVQADCLAATAL
QLLLKVKRHLKIVYSLNDARCQAFSPNEPAKPGEVLSRQNIPFAIGEIRTSLPTTHQELI
QRYQEFKSSLKEDVVDYSLYTANTKRKRPTPRKGRKSGYMGGEDDEDDHDDEDWTGGVRR
LSNSGRKGNSNRGSRQR
NT seq 5454 nt   +upstreamnt  +downstreamnt
atgagcaatccaatcgttcccggttctttggtttcggcctccggctctggctccggctgg
ggtcaccgaggcatcggcctctccaacaccatacactccgaagtcgcgccgtgcttgcct
ttgccctcgctcccggtcttctgcggcgcctctaatcaggacctccgactcttcgacgag
cctggccgtggtagcttcagctcgcttgaccgcagtgaggttcttgctcagtccagtaga
atcgctgatctgctacgccaaaccgatgtgtcttacttgaatctcaaaaaggatgcaagg
gtagtttcatatggctatgcggaacctttagaactacatgaccaagttttgcaatgccat
ccagaagcatttgagtgcagtactgcaggtcctattaaggagcaaatatctagcggtacg
gtatcagaaaagaagccctttgaacaaagtgtgcctgtcacagttcaagctcaaagaggc
aatagtgctgctcacaattatcatactgactatgttgttaccaatcatgtatcaacatcg
tcttctagaaaaccaaaactcaagaagaaaggtggcgatgacttctcatcatcagttgga
ccggatcatgctgagattcaagatgccaccatcggaagcttttgtgagttgttagaggac
ttctgtggtagagctgaaattcctagtgatgatcgggatgaagcagagtggttatcagtt
cctctttctgatcttagaatgcttgtaactgaaataatgtctatccgtgcaaagaaactt
ctacatttggttcctgtagatgttcttgttaggctgttaaaggttctagatcatcagata
catcgagcagaaggcttgtcaatagatgaatgcgagcactcagattcagatatagtttta
tcgatcttttgtgctctggagtctattcatgctgctctagcagtgatgggttacaatgaa
atgcaaaagcagctatataaagaagagataattgaaagaattctggagttctctaggcat
cagattatggatgttatgtgtgcgtatgatccatcatatcgtgctttgcataaaccaagc
gaaaatggagaatttgaaggtgatgaagatgaagagcctggtcctgaatttggttcggca
agtaagaagcggcgtagcgttaagacagttcgagtgaagaagtcatcattaaacaaggtc
tctgctgcaatgaataccattcttcagaaaatgtgcactattcttagtttactcaaggat
ttattgttaatagagagattatctgatagttgcatcttacaacttgtgaaaacgagcttc
acgacattcttggtggataatatccaactcttgcaactgaaggcaattggtttaattagt
gggatattctattcatatacacagcatcgtacttatgtgatagatgaaatacttcagctg
ctttggaagttaccatcctcaaagcgagcattaagatcctatcacctgcctgatgaagaa
caaaggcagattcagatgataacagctttgctgattcagttggttcactgtagtgcaaac
cttcctgaagctttaaggcaagcaacaagtggcaatcccattttagaagtctcaattgat
tctagttacccaaccaaatgtcaagagtcagccacagaggcatgttgtcttttttggacc
cgtgtgcttcagcgttttgcaagtttgaagactcaagatgcatctgagatgaaagcaatg
atggagaatcttgttatggatttgctgacaacattgaatttgcctgaatatcctgcttca
gctcctattttggaggttctgtgtgtcttgttactccagaatgctgggctgaaatctaaa
gacatctctgcacgtacaatggccattgaccttcttggtacaatagctgcgagattgaag
cgtgattcggtgctttgcaggatggacaaattttggatactacaggaattggatagtgcc
agtgatgttgatcgcagttatccaaaaggttcgtgttctatttgtttggatggaagggtt
gaaaagttgttctttacatgtcaaagttgtcagaggttgtttcatgctgactgcatgggt
gtaagagagcatgaagttcctaatagaagctggcagtgtcagatttgcatctgcaggaag
caacttctcgtattacaatcatactgtaagtcgcaatgcaaggatggtgggaaaaagact
cacaatttgtcagaaaagaaccctgaagcttctgagacaattgcaaaagttgaaattgtt
caacagctgctattgaattacctgcaagatgttggttctgatgatgttcatctttttgtg
cgctggttttatctttgcttgtggtacaaggatgatccaaaatctcagcagaagctcata
tactatcttgctagattgaaatcaaaagcaataatacgtgattctggaactacttcattg
ttgacaagggattcagtcaagaagattactttggcattgggacaaaataactccttctcc
agagggtttgataagattcttcatatgcttctggcaagtttgagggagaattctcctgta
attagggccaaggctctaagagcggttagtattattgtagaagctgatcctgaggtactg
tgcgatagacgtgtgcaattggctgttgagggaaggttctgtgattctgcaatatctgta
agggaagcagcactggaacttgtgggcaggcacattgcttcacatcctgatgttggtttg
cagtactttgagaaggttgctgagagaattaaagatactggagttagtgttcgaaaacga
gctatcaaaattattcgggatatgtgcacttcaaatggcaacttctctggatttacaagt
gcctgtattgagataatttctcgtgttagtgatgatgaatcaagtattcaggatcttgtt
tgcaagacattttatgagttctggtttgaggaaccttctggttcagagagacttgttttt
ggagatggtagttctgttccactggaggtggctaaaagaactgagcagattgttgaaatg
ttgaggaggatgccaaatcaccaacttcttgtcactgttattaagcgcaacttagctctt
gattttttcccgcaatcagctaaggctgctgggatcaaccccgtgtccctaacatcggtg
cgcaaacgttgtgagttaatgtgcaagtgcttattggaaaagatattgcaggtagaggaa
atgaacagtgaggaagtggaggtgcgtgcactcccttatgtgctggtcttgcatgcattt
tgtgttgtggatccaaaactctgtgcccctgcctctgatctttctcagtttgtggttacc
ctacagccatatcttaagacccaggttgacaatcgaatggttgctcagttactggagagt
gtaatttttataattgattctgttctaccattgcttcgaaaattacctcaaactgttgtt
gaagaactcgagcaggacttgaagcacatgattgttcggcattcctttttgacagttgtc
catgcatgcatcaagtgtctttgctctttgggcaaagttgcaggaaaagctgctagtgtg
attgagtatcttattcaggtgttttttaaacgtttggatactcagccagctgataacaag
cagcaagtggggcggtcccttttttgccttggattgcttatacgctatggaaaatctttg
ctgagcgactccagtagcagaagtattgatgtggtcagtagtctcagcttgttcaaaaaa
tatctccgcatggaggatttcattgtgaaggttagatcattgcaggcattaggctttgtt
ttaattgcttggcctgaatatatgttggaaaatgatattgggaaaatactagaggcaact
ttgtcttctggctgtgatgttcgaattaagatgcaagcgttgcaaaacttatacgaatat
cttcttgatgcggaaagtcaaatgggaacagataaagcaagcaacaatacaattcattgt
tctgtagaaggtggccacagtgtacctgttgctgcgggcgcaggagatactaatatatgt
gggggtatagttcagttgtattgggataatatcttaggtagatgtctggacttcaatgaa
ccggttcggcaatcagcccttaagattgttgaagttgtgctgcgccagggtcttgttcat
cccattacttgtgtcccgtaccttatagcccttgaaacagatccgcaggaagtcaattca
aagttggctcatcatttgttgatgaatatgaatgagaagtaccctgcattttttgaaagc
cgtttgggggatggccttcaaaagtcattcatttttatacaattgataagtggtattcat
gaaaatgtaaaccagaaagtccaatacaaggtcccaggaaatgtgaaggggaaacctgat
ggtggctcattttctcaagcaaggcttggagtctctagaatatacaagcttatccgtgga
aaccgagtttcaagaaacaaatttatgtcctcaatcgtgcggaagtttgataaccccagc
tggaatgattctgtagtccatttcctgatgtactgtgctgaaatacttgctttgctacca
ttcacaacacctgatgagccactatatttgatctatgctataaatcgagtaatacaagtc
agggctggggcactcgaggcaaatatgaaaggcttgagtatgtatttgtcacaaagatat
ctggagaagataccttatgagaatggacagcaagagcctgctgttaagcctgacttcaat
gaggtggcttcaatggatttgaatgggacaattcaacatgagccggctgttcagcctatt
ttcaaccataccgtggatttgaatgagagtatacggcaagagacaactgatcagcctgtc
ccaatccatagcatctcactggaggcaaagatacatagcatggggtctgatgtttctatt
gttctttctgcagatgatctgcggaaagttcaggctgactgtctggcagctactgcgttg
cagcttcttttgaaagtaaagaggcacctaaaaattgtgtatagcctgaatgatgcccgg
tgccaggctttttccccaaatgaacctgcaaaacctggtgaggttctctccagacagaac
attcccttcgccattggtgaaatacgcactagtttgcctaccactcatcaagaattgata
caaagatatcaggaattcaagagttctctgaaggaagatgtggttgattattcgctttac
acagcaaataccaagaggaagcggcccacccccagaaaaggacggaaatccggatacatg
ggaggtgaagatgatgaagatgatcatgatgatgaggactggacaggtggggttcgcagg
ctaagtaatagcggcagaaaaggtaacagcaacaggggaagtaggcagcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (39)   

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