KEGG   Juglans regia (English walnut): 108991714
Entry
108991714         CDS       T05245                                 
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
  KO
K15449  tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:jre03016]
    108991714
Enzymes [BR:jre01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.44  tRNA 4-demethylwyosine synthase (AdoMet-dependent)
     108991714
Transfer RNA biogenesis [BR:jre03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    108991714
SSDB
Motif
Pfam: Flavodoxin_1 Wyosine_form Radical_SAM
Other DBs
NCBI-GeneID: 108991714
NCBI-ProteinID: XP_018821629
UniProt: A0A2I4EQG7
Position
15:complement(7701242..7717546)
AA seq 648 aa
MSLSSVPARLTLLALLSASSFYCFYKSRRLRQLKFSLNPIPYTNPNLSHSKAKIFFVSQT
GTSEALARRLFDLLSSNSLSFDLVDPKDYEPEDLPKESLVLIIASTWEDGKPPPNAKFFS
SWLSESAEDFRVGSLLLSRCKFAVFGVGSGAYGATFNAVARDYSKQMRALGANEILPVWE
GDVDNGDFDEVFEAWSAKVVGLLKVGVLDNGAVLRSETEALAGGVSDAESFGSSDEDEDR
EGSAEIVDLEDIAGKGPSRKSTVMAESNGKLNGKKEMVTPVIRASLEKQGYKIIGSHSGV
KICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWK
MDDPLEIVNTAIDLHTNMIKQMKGVPGVKLERLMEGLAPRHCALSLVGEPIMYPEINTLV
DELHRRRISTFLVTNAQFPEKIEALKPVTQLYVSVDAGTKESLKAIDRPLFGDFWERFID
SLKALKEKQQRTVYRLTLVKGWNIEDIDAYSNLFSIGKPDFVEIKGVTYCGSSATSKLTM
ENVPWHSDVKAFSETLALRSQGEYEVACEHVHSCCVLLANTEKFKVNGKWFTWIDYEKFH
DLVASGKPFDSMDYMAATPSWAVYGAEEGGFDPDQSRYKKERHHKSGR
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgtccctctcctctgtccctgctcgactcacccttctcgcccttctctctgcctcctca
ttctattgcttctacaagtctcgccgcctcagacaactcaaattctccttaaaccctatc
ccttatactaaccctaatctctctcattcgaaagccaagatcttctttgtttcacaaact
ggtacctcggaagccctagctcgccgtctcttcgatcttttatcgtcgaacagtctgtcg
ttcgaccttgtcgatcccaaggactacgagcctgaggacctcccgaaagaatcacttgtt
ttaatcatcgcttccacctgggaagatggcaagccccctccaaatgccaagttcttctca
agttggctctccgagagcgcagaggactttagggtcgggtctctgttgctgtctcggtgt
aaattcgcggtcttcggagtgggaagcggtgcttacggcgctacattcaatgcggttgcg
agggactattcgaagcagatgagagcgttgggtgccaacgagattttgccagtctgggaa
ggggatgtggataacggtgattttgatgaggtatttgaggcctggagtgctaaagtggtt
gggcttttgaaggttggcgtcttagataatggtgcagttttgcgttctgagactgaggcc
ttagctggtggggtgagtgatgctgagagttttggtagctcggatgaggatgaggatcgg
gaaggcagcgcggagattgttgatctggaggatattgcgggaaaagggccatcgaggaag
tcgacggtaatggctgaaagtaacgggaaattgaatgggaaaaaagagatggtgactccg
gtgattagggcgagcttagagaagcagggatataaaattattggttcacatagcggtgtg
aaaatttgtagatggaccaaatcacagcttagaggccggggaggttgctacaagcactca
ttttatggaattgagagtcataggtgtatggaggcaacccctagtttggcatgtgccaat
aaatgtgttttctgttggagacatcatacaaatcctgttggaaagagttggcagtggaag
atggacgatccgctagagattgtgaatactgccatagacctacatacaaatatgattaag
caaatgaaaggagtacctggtgttaaattggagcgattaatggagggtctcgcacctagg
cattgtgccctatctcttgttggtgaaccaattatgtatccagagattaatacattagtg
gatgagctgcaccggcggcggatatctacttttctagttacaaatgcacagtttcctgaa
aagattgaagcacttaagcctgttacccagttatacgtgagtgtagacgctggaacaaag
gagagcttgaaggcaattgataggccactctttggagacttttgggagcgattcattgat
tccttaaaagctctcaaggagaaacaacagcgaactgtataccggctcactctggtgaaa
ggctggaatatcgaagatatagatgcttattctaatctctttagtattggaaaacctgat
tttgttgaaataaaaggcgttacatattgtggatcgtctgctacatcaaagttgacaatg
gaaaatgtcccatggcattctgatgtgaaagctttttctgaaaccttagctctaagaagc
caaggggagtatgaggttgcatgtgaacatgtccactcctgctgtgtcctcctggcaaac
actgagaagtttaaggtcaacggcaagtggttcacgtggatagattatgaaaagttccat
gacttggtggcttctggaaaaccttttgacagcatggattacatggctgccacaccatcc
tgggctgtctatggagcagaggaaggtggatttgatccggatcagtctcgatataagaag
gagcgacatcacaaatcgggccgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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