KEGG   Juglans regia (English walnut): 109009389
Entry
109009389         CDS       T05245                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Organism
jre  Juglans regia (English walnut)
Pathway
jre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109009389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109009389
   03036 Chromosome and associated proteins [BR:jre03036]
    109009389
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109009389
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     109009389
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    109009389
SSDB
Motif
Pfam: DEAD Helicase_C TFIIA
Other DBs
NCBI-GeneID: 109009389
NCBI-ProteinID: XP_018845393
UniProt: A0A2I4GNC0
Position
7:6854043..6864006
AA seq 502 aa
MNNNRGRYPPGIGAGRGGGMNLNPAFQSRVPQQHYVQRSLVQQQNHHQQQQHQYQQQQQQ
YHQQQQQQQQQWLRRGQLGGADSIVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTE
DVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA
AFCIPALEKIDQDNNAIQVVILVPTRELALQTSQVCKELGKHLNIQVMATTGGTSLKDDI
MRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIRFMPA
NRQILMFSATFPVTVKDFKDRYLQKSYIINLMDELTLKGITQFYAFVEERQKVHCLNTLF
SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV
CTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI
EQELGTEIKQIPPHIDQAIYCR
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgaacaacaataggggtaggtatccgccgggaatcggcgctggccgaggcggaggcatg
aatctgaacccggcattccagtcgagggtcccgcagcaacattacgtgcagaggagcttg
gtgcagcagcagaaccaccaccagcaacagcagcaccagtaccagcaacaacagcagcag
tatcatcagcaacagcaacagcaacagcaacagtggcttaggagaggccagttgggtggt
gccgattcaattgtcgacgaggtcgagaaaactgtgcagtccgaggccgtcgactcaagt
tcacaagactggaaggcaaggctaaagatacctccgcctgatacacgctatagaactgag
gatgtgacagcaacaaagggaaatgagtttgaagactactttctgaagcgtgagttgctt
atgggaatatatgagaaggggtttgaaagaccgtctcctattcaggaagaaagtattcct
attgctttaactgggagtgatattcttgctagagcaaaaaatggaactgggaaaacagct
gcattttgcattcctgcattggaaaaaattgatcaagataacaatgctattcaagttgtt
atactcgttcccacccgagagttggctcttcaaacatcacaagtctgtaaagaacttggg
aagcatttgaatatccaagttatggctacaacgggtggtaccagcttaaaggatgatatc
atgcgcttatatcaaccagttcatttactagttggaactcctggaagaatcttagatctt
gctaaaaaaggtgtatgcattttgaaagactgttctatgcttgttatggatgaggctgat
aagcttctgtctccggaatttcaaccatcaatagagcagctaattcgatttatgcctgca
aaccgtcaaatattgatgttttcagctacatttcctgttacagtcaaggactttaaagac
agatatcttcaaaagtcatatattattaaccttatggatgagcttactctgaagggtatc
acacagttttatgcttttgttgaagaaagacagaaagtccactgcctaaatacccttttc
tccaagctgcaaataaaccaatcaatcatcttctgcaactcagtgaatcgggttgaacta
ttggccaagaaaattaccgaacttggttattcttgtttttatattcatgcaaagatgctg
caagaccatcggaacagagtatttcatgatttccgcaatggtgcatgcaggaatctggtt
tgcactgatctatttacaaggggaatagacattcaagcagtcaatgtggttattaacttt
gattttcccaagaactcagaaacatatctgcacagggttggtcgatctggaaggtttggg
caccttggtttagccgtgaatttgatcacatatgaggaccgctttaacttgtaccggatt
gagcaagaacttgggactgagataaagcaaattccaccacatattgatcaggcaatatac
tgtcggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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