KEGG   Juglans regia (English walnut): 109013837
Entry
109013837         CDS       T05245                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28-like
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109013837
   03009 Ribosome biogenesis [BR:jre03009]
    109013837
Spliceosome [BR:jre03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    109013837
Ribosome biogenesis [BR:jre03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    109013837
SSDB
Motif
Pfam: DEAD Helicase_C ARTD15_N AAA_22
Other DBs
NCBI-GeneID: 109013837
NCBI-ProteinID: XP_018851597
UniProt: A0A2I4H626
Position
7:14182068..14191952
AA seq 752 aa
MAPAFVFEPPSDEELDHFDAEEEEEEETEELEQVAKEEEDDEDEEKRQRPSNHKSQSPWD
FGSYSESVAEEHARRSTTSIDFKISRALQSRSVPITNDDSDNAEDESESEPDKQEDYNPE
DEDDGASNAGESKPFFSPSEGASFHANSFMELNLSRPLLRACEALGYIKPTPIQAAVIPL
AMTGRDICGSAITGSGKTAAFTLPTLERLLFRPKRVPAIRVLILTPTRELAVQVHSMIEK
LAQFTDIRCCLVVGGLSTKVQEAALRSMPDIVVATPGRMIDHLRNSLSVDLDDLAVLILD
EADRLLELGFNAEIQELVRLCPSRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPSTKR
PATLTEEVVRIRRMREVNQEAVLLALCSKTFTSRAIIFSGTKQAAHRLKILFGLAGLKAA
ELHGNLTQVQRLDALELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPRDVTSYVHRV
GRTARAGREGYAVTFLTDNDRSLLKDIAKRAGSKLKSRIVAEQSITKWSEIIEHMEDQVA
AVLQEESEERALRKAEMEATKAENLIAYKDEIYSRPKKTWFVTEKEKKLVSKAAKASLEK
ENNPGKDLISVQQAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDENQINKLEGNGK
MNKENTGKSLVDVGYRRAKAVKAKKRAQDAGKIVKKTSKKSKPLTQKTHSRTEEMRELFQ
SDMSDRKQNRNVTAPKKKPKSSFKSKSRYKRK
NT seq 2259 nt   +upstreamnt  +downstreamnt
atggctccggctttcgttttcgaacccccaagcgacgaagaacttgatcacttcgatgcc
gaagaagaagaagaagaagaaacagaagaattagaacaagtagcaaaagaagaagaagac
gacgaagacgaagaaaaacgacagcggccttctaatcacaaatctcaatctccatgggac
ttcggttcctactccgaatcagtcgccgaagaacacgctcgtcgcagcacaacctccatc
gactttaagatctccagagcacttcaaagccgctccgttccaatcaccaacgacgactcc
gataacgccgaagacgaatccgagtccgaacccgacaaacaagaagattataaccccgag
gatgaagatgatggggccagtaatgccggtgagagtaaacctttcttttcaccttccgag
ggagcctctttccatgccaattcgttcatggagctaaatctatcgcgccctctgcttcgg
gcttgcgaagccttggggtacattaagcccacgccaattcaggcggctgtcataccatta
gcaatgaccgggagagatatctgtgggagtgcaatcactggttccgggaagactgctgcc
tttacgctaccaactttggagaggttattgttccgtcctaaacgtgtgccagcgataagg
gttcttattcttactccaactcgggagttggcagttcaggttcacagtatgatagagaaa
cttgctcaatttactgacatcagatgttgcctggttgtcggtggactttcaacaaaggtg
caagaggcagccttgagatcaatgcccgatattgttgtggccacaccaggacgcatgata
gatcatttacgcaattctttatctgtggatttggacgatcttgcagttctaatccttgat
gaggctgaccgccttctggagcttggatttaatgctgaaatccaggagctggtccgtcta
tgtccatcaagaagacagaccatgctgttttcagctacaatgactgaagaagttgacgag
cttatcaagctttctctgaccaaacccttgcgcctctcagctgacccttccacgaaacgg
cctgcaacattgacagaggaggtggttaggatacgtcgtatgcgtgaagtaaatcaggaa
gcagttctgcttgcattatgctcaaagacttttacttccagagcaatcatcttcagcgga
acaaaacaggctgcacatcggttgaagattctatttggattagctggtcttaaagctgct
gagcttcacggaaatcttacacaagtccagcgccttgatgctttggaactcttcagaaag
caggaagttgatttcctgattgcaactgatgtagctgctcgtggacttgatatcataggt
gttcaaacagttataaattatgcatgtcctcgggatgttaccagctatgttcatcgtgtt
ggtcgtacagcaagagctggtagggaaggatatgctgttacatttctaacagataatgac
agatctcttttgaaagacattgctaagagagctggttcaaagctgaagagtcgaattgtt
gctgagcaatcaataactaagtggtctgagataattgagcatatggaagatcaagtggct
gcagttcttcaagaagagagtgaagagagagccctacgaaaagctgaaatggaagcaaca
aaggctgaaaatttgattgcatataaggatgaaatttattcacggcccaaaaagacctgg
tttgttacagaaaaagagaagaagcttgtctcaaaggctgcaaaggcatctttggaaaaa
gaaaacaatcctggaaaagacttaatcagtgtccaacaagccgaagacctcaagatgaag
gaaaagaggaagcgagagcgtgagaaaaatttgcctcggaagaagcgtcgaaaattggaa
gcagctagagaaatgttggaggatgaaaaccaaattaacaaattagaaggtaatgggaaa
atgaataaagaaaatactggaaagtcacttgtcgatgtgggttaccgacgggcaaaagca
gtgaaggctaaaaagagggcgcaagatgctggcaagattgtgaagaagaccagtaagaaa
tcaaaacctctaacccaaaaaactcattcaagaacagaagagatgcgggagctattccag
agtgacatgagcgatagaaagcagaacagaaacgtcactgcacccaagaaaaaacccaaa
agttcatttaagagcaagtcaaggtacaagcgcaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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