KEGG   Ketobacter alkanivorans: Kalk_17395
Entry
Kalk_17395        CDS       T05294                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
kak  Ketobacter alkanivorans
Pathway
kak00300  Lysine biosynthesis
kak00550  Peptidoglycan biosynthesis
kak01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:kak00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Kalk_17395
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Kalk_17395
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:kak01011]
    Kalk_17395
Enzymes [BR:kak01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Kalk_17395
Peptidoglycan biosynthesis and degradation proteins [BR:kak01011]
 Precursor biosynthesis
  Amino acid ligase
   Kalk_17395
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase Antitox_RHH
Other DBs
NCBI-ProteinID: AUM14089
UniProt: A0A2K9LNZ0
Position
4062013..4063530
AA seq 505 aa
MKSETRVVRDLQGIVPFLSIRDDWKNTVVTGLAVDSRKVQAGNCFIAYPGHGSDGRNFLR
AAFSAGASSALVDAEGFAIDPSIERPVIPVDALRSRLGLIAANFYGDPSSQLKLLAITGT
NGKTSVSQLVAQALDYLGKRCGVIGTLGNGLVGKLELTTNTTPDVVECNRLLAEMLVQGA
EVVAMEASSHGLIQGRIDGLHVHTALVTNISRDHLDYHGTMEAYAEAKALLACHVGLKNL
VLNLDDERVAAMRSVAAPDTRIWSFSLDDSKAATVKATNVVYGKQGVDIYVEHEGQSTVV
RSNLIGEFNSSNLLASLTLMLSAGVELRLAADALSHCKPVIGRMQRISFEADQPMVIVDF
AHTPDALEKALIALRKHTQGRIWCVFGCGGDRDAGKRPLMAAVAAELADKVILTADNPRS
EKLSTILSDMVKGLPPQVAFQIVDDRADAVAEAILNAAVGDVVLVAGKGHEDYQEIQGVK
YAYSDVQQCRLALHRRSDVCRKGES
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgaagagcgaaaccagagtggtgcgagatcttcaaggtatcgttccatttttatcaata
agagatgattggaaaaatacagtggtgacagggttggcggttgacagtcgtaaagtgcag
gcaggcaattgttttattgcctaccctggccacggtagtgatggtcggaactttctgcgt
gctgctttctctgccggagcgagcagtgcgctagtcgacgctgagggctttgctattgat
ccgtcgatcgagcggcctgtgattccagttgatgcattgcgttcgcgcttgggcctgatc
gcggcaaatttttatggtgatcccagtagccagttgaagcttttggcgataaccggtacc
aacggaaaaaccagcgtcagccaattggttgcacaggcactggattaccttggtaagcgt
tgcggcgtaattggtacattagggaatggcttggttggtaagcttgagctgacgacaaat
accactcctgatgtggttgagtgcaatcggctgctagcggaaatgcttgttcagggtgca
gaggttgttgcgatggaagcctcctctcatggtttgattcaagggcgcattgatgggctt
catgtccatacagcgttagtaaccaatatcagtcgcgatcaccttgattatcacggcacc
atggaggcctatgcagaggctaaggcgttgctggcttgtcatgtgggtttgaaaaatctg
gttctaaatctggatgatgaacgcgtggctgccatgcgttcggttgctgcacccgacacc
cgaatatggtcgttctcattggatgattcgaaggctgcaacggtaaaagccaccaatgtt
gtttacggcaagcagggcgtagatatttacgttgagcatgaagggcagtcaacggttgtt
cgcagtaacctcataggtgagtttaatagttcaaatttgctggcttcgctcactctgatg
ttgtctgctggagtggagctgcgcttggctgcagacgcacttagtcattgcaaacctgtg
ataggacgtatgcagcgtatatcgtttgaagcagatcaaccaatggtgattgttgatttt
gcacatacgccagacgctctggaaaaagcgttgattgccttgcgtaagcatactcagggt
cggatctggtgtgtatttgggtgtggtggcgatcgtgatgcgggtaaacgtccactgatg
gctgcagtcgctgctgaattggcggacaaggttatcctgacagcggataatccacgcagt
gaaaaattgagcaccatccttagcgatatggtgaagggtcttccgcctcaagtggcattt
cagatcgttgatgatcgtgctgacgcggttgctgaagcaatactcaatgctgcagtgggc
gatgtggttttggtggcaggtaaaggtcacgaggactaccaagagatacagggcgtaaag
tacgcatatagtgatgttcagcaatgcaggctcgcactacatagacgttcagatgtttgt
cgcaagggggaaagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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