KEGG   Kozakia baliensis: A0U89_13595
Entry
A0U89_13595       CDS       T04547                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
kba  Kozakia baliensis
Pathway
kba03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kba00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A0U89_13595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kba03021]
    A0U89_13595
   03019 Messenger RNA biogenesis [BR:kba03019]
    A0U89_13595
Transcription machinery [BR:kba03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     A0U89_13595
Messenger RNA biogenesis [BR:kba03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     A0U89_13595
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 OB_RNB AAA_22 AAA NACHT Spore_III_AA
Other DBs
NCBI-ProteinID: AOX17988
UniProt: A0A1D8UWE9
Position
2876701..2877990
AA seq 429 aa
MHLAELKKKSPADLLAYAEELQIENASSMRKQDIMFAILKTLAENDQAIYGEGTLEILPD
GFGFLRSPEANYLPGPDDIYISPAQVRRFGLRPGDTVEGQIRAPRDGERYFSLLKVNSIN
FEAPDSVRQRINFDNLTPLYPERRLKMEVEQTAPAEPPGKGKKDQRDYTPRVIDLVAPIG
MGQRALIVAPPRTGKTVMLQSIASSISANHPEVFLIVLLIDERPEEVTDMARSVRGEVVS
STFDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGV
DANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELILDRKL
ADKRTFPAIDITKSGTRKEELLVDRASLSKMWVLRRILAPMGTMDAMDFLLDKLKYSKSN
QDFFDAMNN
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgcatcttgctgaactcaaaaaaaaatctccggctgatctgctcgcttatgcggaagag
ctgcagatcgaaaatgcctcgtccatgcgcaaacaggacatcatgtttgccattctcaag
acgctggcggaaaacgatcaggctatctacggcgaaggcacgttagaaatcctgccagac
ggcttcgggttccttcgctctccggaagcgaattatctccccggaccggacgatatctat
atttcccccgcccaggtgcgccgttttggcctgcgccccggcgatacggttgaggggcaa
attcgcgccccgcgtgatggagagcgctacttctcccttctcaaagtcaattcgattaat
ttcgaagcgccggattccgtccgccagcgcatcaatttcgacaatctgacgccactttac
cctgagcgccgcttgaagatggaagtggagcaaacggctcctgccgagccgccggggaag
ggcaagaaagaccagcgcgactatacgccgcgcgtgatcgatctcgtggcgccgatcggc
atgggccagcgtgcgctgatcgtggcgccgccgcgcacgggtaagacggtgatgctgcaa
agcatcgcgtcatcgatctcggccaaccatcccgaagttttccttatcgttctgctgatt
gacgagcgacccgaggaagtgaccgacatggcgcgttcggtgcgtggcgaagtggtttcc
tccaccttcgacgaaccggcgacccgtcatgtgcaagtgacggaaatggtgctggaaaag
gccaagcgccttgtcgagcacaaacgcgatgtcgttatcctgctggattcgatcacgcgt
ttggcgcgcgcctacaacacggtcgtgccgtcgtcgggcaaggtgttgacgggtggtgtg
gacgctaatgcattgcagcgtcctaagcgcttcttcggtgcggcgcgtaacatcgaggaa
ggtggatcgttgacgatcatcgccacggccttgatcgacacgggcagccgcatggacgaa
gtgattttcgaagagttcaagggcaccggcaactccgaactgatcctcgaccgtaagctg
gccgacaagcgtaccttcccggcgatcgacatcactaagtccggcacgcgtaaggaagag
ctgctggtggatcgtgcatctctgtcgaagatgtgggtgctgcgtcgtatccttgcgccg
atgggcacgatggatgcgatggacttcctgttggacaagctgaaatacagcaaatccaat
caggatttcttcgatgcgatgaacaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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