KEGG   Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis): CKBE_00004
Entry
CKBE_00004        CDS       T02427                                 
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
kbl  Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis)
Pathway
kbl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kbl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CKBE_00004 (rppH)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kbl03019]
    CKBE_00004 (rppH)
Messenger RNA biogenesis [BR:kbl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CKBE_00004 (rppH)
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: AFZ83193
Position
complement(1838..2308)
AA seq 156 aa
MLDNEGYRSNVGIIIVNRQNEVFLGKRIKEEAWQFPQGGVKYGECLEEAMYRELYEEVGL
KPEHVKIIGRTKQWLHYNVPSNFVRKESRGQYKGQKQIWFLLRLIGSDSDVCLSATSSPE
FDAWRWSHYWLPLDNVIEFKRSVYKQALKELSSILF
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcttgataatgaaggttatcgttctaatgttggcattattattgttaacagacaaaat
gaagtttttcttggtaaaagaataaaagaagaggcttggcagttcccgcagggtggagtt
aaatatggtgaatgcttggaggaagctatgtatcgtgagctttatgaagaagttggttta
aaaccagaacatgttaaaataataggaagaactaaacaatggcttcattataatgttcct
agtaatttcgttcgcaaggaaagtagaggccagtataaaggtcaaaaacaaatctggttt
ttgttgcgattgattggtagtgatagcgatgtttgtttatctgcaacatctagtcctgag
tttgacgcatggaggtggagtcattattggttaccattagataatgtaatagagttcaag
aggtctgtttataagcaggctctgaaggagttgtcatctattttattttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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