KEGG   Candidatus Kinetoplastibacterium desouzaii: CDSE_0309Help
Entry
CDSE_0309         CDS       T02465                                 

Definition
(GenBank) formamidopyrimidine-DNA glycosylase (EC:4.2.99.18)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
kde  Candidatus Kinetoplastibacterium desouzaii
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:kde00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    CDSE_0309
Enzymes [BR:kde01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CDSE_0309
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CDSE_0309
DNA repair and recombination proteins [BR:kde03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CDSE_0309
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
complement(103917..104744)
Genome map
AA seq 275 aa AA seqDB search
MPELPEVEITKQGIRNRIFQKKLNKIVIRNNRLRWPIDNNTDEILKERIVLDCTRRSKYI
LIHFEHGIQFIHLGMSGSLQFSYLDKPLEKHDHVEWIFEEFALRLNDPRRFGAVIWHPYE
NGPIELHPLINKLGIEPFSNDFTGEYLYNKFKINNTNIKQALLNGKIVVGIGNIYASEIL
FKSRINPFLKTKYLSINQCEELAQIIIETLNEAIASGGSSIKNFVDSNGKQGSYIEKYAY
VYNREGKQCKICKKNDIIKIYQNNRSTYYCPLCQD
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactacctgaagtagaaattactaaacaaggaataagaaatagaatattccag
aaaaaactaaacaaaattgtcattagaaataatcgtctacgttggcctatagataataat
acagacgaaatactaaaagaaagaatagttttagactgcaccagaagaagtaaatatata
ttaattcattttgaacatggaattcaatttatccatcttggaatgtcaggatcattacaa
tttagctacttagacaaaccactagaaaaacatgatcatgtagagtggatttttgaagaa
tttgctctaagattaaatgatcctagacgtttcggtgcagttatatggcacccatatgaa
aatggcccaatagaattacatccgttaattaataaattaggaatagaaccattttccaat
gattttactggagaatatctttataataaatttaaaatcaataatactaatataaaacaa
gcattactaaatggaaaaatagtagtaggtataggaaatatatacgcatcggagatttta
tttaaatccagaattaacccattcttaaaaaccaaatatttgtcaatcaatcaatgcgaa
gaattagcacaaataattatagaaactctaaatgaagcgattgcatctggaggaagctca
ataaaaaacttcgttgactccaacggcaaacaaggatcatacatagaaaaatatgcttat
gtatataatcgagaaggtaaacaatgcaaaatatgcaaaaagaatgacattataaaaatc
tatcagaataatagatctacttactattgccctttatgccaagattaa

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